Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
PrkdcP97313 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
PrkdcP97313 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
PrkdcP97313 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC8.71□□□□□ -1.02
PrkdcP97313 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
PrkdcP97313 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC8.71□□□□□ -1.02
PrkdcP97313 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
PrkdcP97313 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
PrkdcP97313 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC8.71□□□□□ -1.02
PrkdcP97313 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC8.71□□□□□ -1.02
PrkdcP97313 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
PrkdcP97313 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
PrkdcP97313 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.02
PrkdcP97313 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
PrkdcP97313 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
PrkdcP97313 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
PrkdcP97313 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PrkdcP97313 Gm7049-201ENSMUST00000223520 1712 ntBASIC8.7□□□□□ -1.02
PrkdcP97313 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PrkdcP97313 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC8.7□□□□□ -1.02
PrkdcP97313 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
PrkdcP97313 Gm29410-201ENSMUST00000188383 694 ntBASIC8.7□□□□□ -1.02
PrkdcP97313 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC8.7□□□□□ -1.02
PrkdcP97313 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC8.7□□□□□ -1.02
PrkdcP97313 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PrkdcP97313 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PrkdcP97313 Gm4604-201ENSMUST00000025040 390 ntBASIC8.7□□□□□ -1.02
PrkdcP97313 Gm10288-201ENSMUST00000084614 537 ntBASIC8.7□□□□□ -1.02
PrkdcP97313 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC8.7□□□□□ -1.02
PrkdcP97313 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PrkdcP97313 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PrkdcP97313 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC8.7□□□□□ -1.02
PrkdcP97313 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PrkdcP97313 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
PrkdcP97313 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
PrkdcP97313 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PrkdcP97313 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PrkdcP97313 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
PrkdcP97313 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
PrkdcP97313 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PrkdcP97313 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
PrkdcP97313 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC8.7□□□□□ -1.02
PrkdcP97313 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PrkdcP97313 Gm7719-201ENSMUST00000182374 975 ntBASIC8.7□□□□□ -1.02
PrkdcP97313 Gm6652-201ENSMUST00000186414 1070 ntBASIC8.7□□□□□ -1.02
PrkdcP97313 Gm45909-201ENSMUST00000212413 1031 ntBASIC8.7□□□□□ -1.02
PrkdcP97313 Olfr1347-205ENSMUST00000220413 964 ntBASIC8.7□□□□□ -1.02
PrkdcP97313 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC8.7□□□□□ -1.02
PrkdcP97313 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
PrkdcP97313 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
PrkdcP97313 n-R5s211-201ENSMUST00000093689 119 ntBASIC8.7□□□□□ -1.02
PrkdcP97313 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PrkdcP97313 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PrkdcP97313 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
PrkdcP97313 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PrkdcP97313 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC8.7□□□□□ -1.02
PrkdcP97313 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
PrkdcP97313 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
PrkdcP97313 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PrkdcP97313 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
PrkdcP97313 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
PrkdcP97313 Gm12943-201ENSMUST00000119616 210 ntBASIC8.7□□□□□ -1.02
PrkdcP97313 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC8.7□□□□□ -1.02
PrkdcP97313 Gm24844-201ENSMUST00000158679 127 ntBASIC8.7□□□□□ -1.02
PrkdcP97313 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
PrkdcP97313 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
PrkdcP97313 Gm22877-201ENSMUST00000175451 105 ntBASIC8.7□□□□□ -1.02
PrkdcP97313 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
PrkdcP97313 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PrkdcP97313 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC8.7□□□□□ -1.02
PrkdcP97313 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PrkdcP97313 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
PrkdcP97313 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
PrkdcP97313 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PrkdcP97313 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PrkdcP97313 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PrkdcP97313 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PrkdcP97313 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PrkdcP97313 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PrkdcP97313 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PrkdcP97313 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
PrkdcP97313 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC8.69□□□□□ -1.02
PrkdcP97313 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC8.69□□□□□ -1.02
PrkdcP97313 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
PrkdcP97313 Gm45592-201ENSMUST00000209605 1043 ntBASIC8.69□□□□□ -1.02
PrkdcP97313 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
PrkdcP97313 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
PrkdcP97313 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC8.69□□□□□ -1.02
PrkdcP97313 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
PrkdcP97313 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
PrkdcP97313 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
PrkdcP97313 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
PrkdcP97313 Gm5989-201ENSMUST00000096092 2077 ntBASIC8.69□□□□□ -1.02
PrkdcP97313 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
PrkdcP97313 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
PrkdcP97313 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC8.69□□□□□ -1.02
PrkdcP97313 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
PrkdcP97313 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
PrkdcP97313 Gm5298-201ENSMUST00000201122 892 ntBASIC8.69□□□□□ -1.02
PrkdcP97313 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms