Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43cP86449 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.35□□□□□ -0.11
Trim43cP86449 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43cP86449 Mir874-201ENSMUST00000104769 76 ntBASIC14.35□□□□□ -0.11
Trim43cP86449 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43cP86449 Gm11803-201ENSMUST00000119966 444 ntBASIC14.35□□□□□ -0.11
Trim43cP86449 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.35□□□□□ -0.11
Trim43cP86449 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43cP86449 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43cP86449 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43cP86449 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trim43cP86449 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43cP86449 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43cP86449 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43cP86449 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.35□□□□□ -0.11
Trim43cP86449 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43cP86449 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43cP86449 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43cP86449 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43cP86449 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.35□□□□□ -0.11
Trim43cP86449 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trim43cP86449 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43cP86449 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43cP86449 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trim43cP86449 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43cP86449 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43cP86449 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43cP86449 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43cP86449 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43cP86449 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43cP86449 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43cP86449 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43cP86449 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43cP86449 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43cP86449 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43cP86449 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43cP86449 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.34□□□□□ -0.11
Trim43cP86449 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.34□□□□□ -0.11
Trim43cP86449 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43cP86449 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim43cP86449 Gm8652-201ENSMUST00000181363 964 ntBASIC14.34□□□□□ -0.11
Trim43cP86449 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.34□□□□□ -0.11
Trim43cP86449 Gm5035-201ENSMUST00000215581 927 ntBASIC14.34□□□□□ -0.11
Trim43cP86449 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.34□□□□□ -0.11
Trim43cP86449 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim43cP86449 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43cP86449 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43cP86449 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Trim43cP86449 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43cP86449 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43cP86449 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43cP86449 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43cP86449 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43cP86449 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.11
Trim43cP86449 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim43cP86449 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim43cP86449 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.33□□□□□ -0.11
Trim43cP86449 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim43cP86449 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim43cP86449 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim43cP86449 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Trim43cP86449 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43cP86449 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43cP86449 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43cP86449 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43cP86449 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Trim43cP86449 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43cP86449 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trim43cP86449 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43cP86449 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC14.33□□□□□ -0.12
Trim43cP86449 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43cP86449 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43cP86449 Gm24196-201ENSMUST00000179161 110 ntBASIC14.33□□□□□ -0.12
Trim43cP86449 Gm19931-201ENSMUST00000198920 368 ntBASIC14.33□□□□□ -0.12
Trim43cP86449 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43cP86449 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43cP86449 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43cP86449 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43cP86449 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43cP86449 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.33□□□□□ -0.12
Trim43cP86449 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trim43cP86449 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trim43cP86449 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.33□□□□□ -0.12
Trim43cP86449 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43cP86449 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Trim43cP86449 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43cP86449 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim43cP86449 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.33□□□□□ -0.12
Trim43cP86449 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43cP86449 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43cP86449 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.32□□□□□ -0.12
Trim43cP86449 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43cP86449 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43cP86449 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43cP86449 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trim43cP86449 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim43cP86449 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43cP86449 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43cP86449 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim43cP86449 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms