Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.44□□□□□ -0.58
Atf1P81269 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atf1P81269 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Atf1P81269 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atf1P81269 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Atf1P81269 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Atf1P81269 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atf1P81269 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atf1P81269 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atf1P81269 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Atf1P81269 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atf1P81269 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Atf1P81269 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atf1P81269 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atf1P81269 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atf1P81269 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Atf1P81269 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Atf1P81269 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Atf1P81269 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.43□□□□□ -0.58
Atf1P81269 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atf1P81269 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Atf1P81269 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Atf1P81269 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atf1P81269 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.43□□□□□ -0.58
Atf1P81269 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.43□□□□□ -0.58
Atf1P81269 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atf1P81269 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Atf1P81269 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.43□□□□□ -0.58
Atf1P81269 Gm42612-201ENSMUST00000197986 623 ntBASIC11.43□□□□□ -0.58
Atf1P81269 Gm43170-201ENSMUST00000199827 612 ntBASIC11.43□□□□□ -0.58
Atf1P81269 Gm7730-201ENSMUST00000212486 454 ntBASIC11.43□□□□□ -0.58
Atf1P81269 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Atf1P81269 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atf1P81269 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atf1P81269 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atf1P81269 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atf1P81269 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atf1P81269 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Atf1P81269 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Atf1P81269 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atf1P81269 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atf1P81269 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atf1P81269 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Atf1P81269 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atf1P81269 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Atf1P81269 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Atf1P81269 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf1P81269 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf1P81269 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf1P81269 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf1P81269 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Atf1P81269 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf1P81269 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf1P81269 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Atf1P81269 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Atf1P81269 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf1P81269 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.42□□□□□ -0.58
Atf1P81269 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf1P81269 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Atf1P81269 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Atf1P81269 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Atf1P81269 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.42□□□□□ -0.58
Atf1P81269 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.42□□□□□ -0.58
Atf1P81269 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.42□□□□□ -0.58
Atf1P81269 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.42□□□□□ -0.58
Atf1P81269 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.42□□□□□ -0.58
Atf1P81269 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Atf1P81269 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.42□□□□□ -0.58
Atf1P81269 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Atf1P81269 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Atf1P81269 Gm20949-201ENSMUST00000206478 952 ntBASIC11.42□□□□□ -0.58
Atf1P81269 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.42□□□□□ -0.58
Atf1P81269 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.42□□□□□ -0.58
Atf1P81269 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.42□□□□□ -0.58
Atf1P81269 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf1P81269 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf1P81269 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf1P81269 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.42□□□□□ -0.58
Atf1P81269 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf1P81269 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf1P81269 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.42□□□□□ -0.58
Atf1P81269 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf1P81269 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf1P81269 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf1P81269 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf1P81269 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf1P81269 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Atf1P81269 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Atf1P81269 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.42□□□□□ -0.58
Atf1P81269 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Atf1P81269 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atf1P81269 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Atf1P81269 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atf1P81269 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.41□□□□□ -0.58
Atf1P81269 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atf1P81269 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
Atf1P81269 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atf1P81269 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Atf1P81269 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Atf1P81269 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms