Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
CiitaP79621 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CiitaP79621 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CiitaP79621 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CiitaP79621 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CiitaP79621 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CiitaP79621 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CiitaP79621 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CiitaP79621 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CiitaP79621 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.28□□□□□ -0.12
CiitaP79621 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CiitaP79621 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CiitaP79621 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CiitaP79621 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CiitaP79621 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CiitaP79621 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CiitaP79621 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CiitaP79621 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.27□□□□□ -0.12
CiitaP79621 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CiitaP79621 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CiitaP79621 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CiitaP79621 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC14.27□□□□□ -0.12
CiitaP79621 Gm43579-201ENSMUST00000202387 1307 ntBASIC14.27□□□□□ -0.12
CiitaP79621 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CiitaP79621 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.27□□□□□ -0.13
CiitaP79621 Gm27572-201ENSMUST00000183702 255 ntBASIC14.27□□□□□ -0.13
CiitaP79621 Gm5896-201ENSMUST00000189662 1024 ntBASIC14.27□□□□□ -0.13
CiitaP79621 Gm43118-201ENSMUST00000199149 775 ntBASIC14.27□□□□□ -0.13
CiitaP79621 Gm6458-201ENSMUST00000211573 635 ntBASIC14.27□□□□□ -0.13
CiitaP79621 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CiitaP79621 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CiitaP79621 n-R5s195-201ENSMUST00000082891 119 ntBASIC14.27□□□□□ -0.13
CiitaP79621 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CiitaP79621 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CiitaP79621 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CiitaP79621 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CiitaP79621 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CiitaP79621 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CiitaP79621 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CiitaP79621 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CiitaP79621 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CiitaP79621 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CiitaP79621 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CiitaP79621 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CiitaP79621 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CiitaP79621 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CiitaP79621 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CiitaP79621 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CiitaP79621 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CiitaP79621 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CiitaP79621 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CiitaP79621 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CiitaP79621 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CiitaP79621 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CiitaP79621 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CiitaP79621 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CiitaP79621 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CiitaP79621 Snord83b-201ENSMUST00000104546 94 ntBASIC14.26□□□□□ -0.13
CiitaP79621 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CiitaP79621 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.26□□□□□ -0.13
CiitaP79621 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
CiitaP79621 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
CiitaP79621 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC14.26□□□□□ -0.13
CiitaP79621 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC14.26□□□□□ -0.13
CiitaP79621 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CiitaP79621 Gm45331-201ENSMUST00000209868 554 ntBASIC14.26□□□□□ -0.13
CiitaP79621 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CiitaP79621 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CiitaP79621 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CiitaP79621 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC14.26□□□□□ -0.13
CiitaP79621 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CiitaP79621 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CiitaP79621 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CiitaP79621 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CiitaP79621 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CiitaP79621 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CiitaP79621 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.26□□□□□ -0.13
CiitaP79621 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CiitaP79621 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CiitaP79621 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CiitaP79621 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.25□□□□□ -0.13
CiitaP79621 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CiitaP79621 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CiitaP79621 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CiitaP79621 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CiitaP79621 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CiitaP79621 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CiitaP79621 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CiitaP79621 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CiitaP79621 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CiitaP79621 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CiitaP79621 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CiitaP79621 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CiitaP79621 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.25□□□□□ -0.13
CiitaP79621 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.25□□□□□ -0.13
CiitaP79621 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CiitaP79621 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.25□□□□□ -0.13
CiitaP79621 Gm26185-201ENSMUST00000157692 266 ntBASIC14.25□□□□□ -0.13
CiitaP79621 Gm16379-201ENSMUST00000161469 348 ntBASIC14.25□□□□□ -0.13
CiitaP79621 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms