Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Lhx1P63006 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lhx1P63006 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Lhx1P63006 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lhx1P63006 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.95□□□□□ -0.34
Lhx1P63006 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Lhx1P63006 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lhx1P63006 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lhx1P63006 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.95□□□□□ -0.34
Lhx1P63006 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lhx1P63006 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lhx1P63006 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lhx1P63006 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lhx1P63006 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.95□□□□□ -0.34
Lhx1P63006 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Lhx1P63006 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.95□□□□□ -0.34
Lhx1P63006 Gm16479-201ENSMUST00000121706 932 ntBASIC12.95□□□□□ -0.34
Lhx1P63006 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.95□□□□□ -0.34
Lhx1P63006 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lhx1P63006 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lhx1P63006 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lhx1P63006 Gm27514-201ENSMUST00000183692 110 ntBASIC12.95□□□□□ -0.34
Lhx1P63006 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.95□□□□□ -0.34
Lhx1P63006 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lhx1P63006 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lhx1P63006 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lhx1P63006 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lhx1P63006 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lhx1P63006 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lhx1P63006 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lhx1P63006 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lhx1P63006 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lhx1P63006 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lhx1P63006 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lhx1P63006 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lhx1P63006 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Lhx1P63006 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lhx1P63006 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lhx1P63006 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lhx1P63006 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.94□□□□□ -0.34
Lhx1P63006 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lhx1P63006 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Lhx1P63006 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lhx1P63006 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Lhx1P63006 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lhx1P63006 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lhx1P63006 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lhx1P63006 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lhx1P63006 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Lhx1P63006 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lhx1P63006 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lhx1P63006 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lhx1P63006 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lhx1P63006 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.94□□□□□ -0.34
Lhx1P63006 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lhx1P63006 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lhx1P63006 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.94□□□□□ -0.34
Lhx1P63006 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.94□□□□□ -0.34
Lhx1P63006 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lhx1P63006 Gm17420-201ENSMUST00000164753 153 ntBASIC12.94□□□□□ -0.34
Lhx1P63006 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.94□□□□□ -0.34
Lhx1P63006 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.94□□□□□ -0.34
Lhx1P63006 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.94□□□□□ -0.34
Lhx1P63006 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lhx1P63006 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lhx1P63006 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lhx1P63006 Gm9899-201ENSMUST00000065519 555 ntBASIC12.94□□□□□ -0.34
Lhx1P63006 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.94□□□□□ -0.34
Lhx1P63006 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lhx1P63006 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lhx1P63006 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lhx1P63006 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.94□□□□□ -0.34
Lhx1P63006 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lhx1P63006 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lhx1P63006 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Lhx1P63006 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lhx1P63006 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Lhx1P63006 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lhx1P63006 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Lhx1P63006 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lhx1P63006 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lhx1P63006 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.93□□□□□ -0.34
Lhx1P63006 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lhx1P63006 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lhx1P63006 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lhx1P63006 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lhx1P63006 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lhx1P63006 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lhx1P63006 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Lhx1P63006 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Lhx1P63006 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.93□□□□□ -0.34
Lhx1P63006 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lhx1P63006 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lhx1P63006 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lhx1P63006 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Lhx1P63006 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lhx1P63006 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lhx1P63006 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.93□□□□□ -0.34
Lhx1P63006 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lhx1P63006 Gm7029-201ENSMUST00000173226 450 ntBASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms