Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm5P62322 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC10.97□□□□□ -0.65
Lsm5P62322 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC10.97□□□□□ -0.65
Lsm5P62322 Ighv1-25-201ENSMUST00000195638 345 ntBASIC10.97□□□□□ -0.65
Lsm5P62322 Gm5864-201ENSMUST00000202263 970 ntBASIC10.97□□□□□ -0.65
Lsm5P62322 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm5P62322 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC10.97□□□□□ -0.65
Lsm5P62322 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm5P62322 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm5P62322 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Lsm5P62322 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm5P62322 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm5P62322 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm5P62322 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm5P62322 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm5P62322 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm5P62322 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Lsm5P62322 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC10.97□□□□□ -0.65
Lsm5P62322 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm5P62322 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm5P62322 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Lsm5P62322 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm5P62322 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm5P62322 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm5P62322 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Lsm5P62322 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Lsm5P62322 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm5P62322 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm5P62322 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Lsm5P62322 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm5P62322 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm5P62322 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm5P62322 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm5P62322 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm5P62322 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm5P62322 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm5P62322 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm5P62322 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm5P62322 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm5P62322 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm5P62322 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm5P62322 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm5P62322 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC10.96□□□□□ -0.65
Lsm5P62322 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Lsm5P62322 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC10.96□□□□□ -0.65
Lsm5P62322 Gm38225-201ENSMUST00000194001 393 ntBASIC10.96□□□□□ -0.65
Lsm5P62322 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
Lsm5P62322 AC132467.2-202ENSMUST00000227726 559 ntBASIC10.96□□□□□ -0.65
Lsm5P62322 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Lsm5P62322 Gm3695-201ENSMUST00000087222 1009 ntBASIC10.96□□□□□ -0.65
Lsm5P62322 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Lsm5P62322 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Lsm5P62322 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Lsm5P62322 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Lsm5P62322 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Lsm5P62322 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Lsm5P62322 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC10.96□□□□□ -0.66
Lsm5P62322 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Lsm5P62322 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Lsm5P62322 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC10.96□□□□□ -0.66
Lsm5P62322 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Lsm5P62322 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Lsm5P62322 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC10.96□□□□□ -0.66
Lsm5P62322 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.66
Lsm5P62322 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Lsm5P62322 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm5P62322 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm5P62322 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm5P62322 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm5P62322 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm5P62322 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm5P62322 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm5P62322 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm5P62322 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm5P62322 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Lsm5P62322 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm5P62322 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm5P62322 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm5P62322 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm5P62322 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm5P62322 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm5P62322 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC10.95□□□□□ -0.66
Lsm5P62322 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm5P62322 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm5P62322 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm5P62322 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC10.95□□□□□ -0.66
Lsm5P62322 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm5P62322 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm5P62322 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC10.95□□□□□ -0.66
Lsm5P62322 Gm15427-201ENSMUST00000117288 531 ntBASIC10.95□□□□□ -0.66
Lsm5P62322 Gm2810-201ENSMUST00000118681 990 ntBASIC10.95□□□□□ -0.66
Lsm5P62322 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC10.95□□□□□ -0.66
Lsm5P62322 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC10.95□□□□□ -0.66
Lsm5P62322 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm5P62322 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm5P62322 Gm27631-201ENSMUST00000184163 466 ntBASIC10.95□□□□□ -0.66
Lsm5P62322 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC10.95□□□□□ -0.66
Lsm5P62322 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm5P62322 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Lsm5P62322 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms