Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm3P62311 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm3P62311 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm3P62311 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm3P62311 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm3P62311 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Lsm3P62311 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lsm3P62311 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lsm3P62311 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm3P62311 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lsm3P62311 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm3P62311 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm3P62311 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Lsm3P62311 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm3P62311 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm3P62311 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.99□□□□□ -0.49
Lsm3P62311 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm3P62311 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Lsm3P62311 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm3P62311 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm3P62311 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm3P62311 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC11.99□□□□□ -0.49
Lsm3P62311 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC11.99□□□□□ -0.49
Lsm3P62311 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm3P62311 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Lsm3P62311 Ighv8-7-201ENSMUST00000194349 297 ntBASIC11.99□□□□□ -0.49
Lsm3P62311 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC11.99□□□□□ -0.49
Lsm3P62311 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC11.99□□□□□ -0.49
Lsm3P62311 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.99□□□□□ -0.49
Lsm3P62311 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.99□□□□□ -0.49
Lsm3P62311 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Lsm3P62311 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm3P62311 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm3P62311 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Lsm3P62311 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm3P62311 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm3P62311 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm3P62311 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC11.99□□□□□ -0.49
Lsm3P62311 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm3P62311 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm3P62311 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Lsm3P62311 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm3P62311 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm3P62311 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Lsm3P62311 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.99□□□□□ -0.49
Lsm3P62311 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm3P62311 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.99□□□□□ -0.49
Lsm3P62311 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lsm3P62311 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm3P62311 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm3P62311 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm3P62311 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm3P62311 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm3P62311 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.98□□□□□ -0.49
Lsm3P62311 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm3P62311 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.98□□□□□ -0.49
Lsm3P62311 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
Lsm3P62311 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm3P62311 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.98□□□□□ -0.49
Lsm3P62311 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Lsm3P62311 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.98□□□□□ -0.49
Lsm3P62311 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm3P62311 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm3P62311 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm3P62311 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm3P62311 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm3P62311 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm3P62311 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm3P62311 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC11.98□□□□□ -0.49
Lsm3P62311 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC11.98□□□□□ -0.49
Lsm3P62311 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC11.98□□□□□ -0.49
Lsm3P62311 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lsm3P62311 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC11.98□□□□□ -0.49
Lsm3P62311 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Lsm3P62311 Gm29310-201ENSMUST00000185468 696 ntBASIC11.98□□□□□ -0.49
Lsm3P62311 Gm21825-201ENSMUST00000185728 696 ntBASIC11.98□□□□□ -0.49
Lsm3P62311 Gm29109-201ENSMUST00000185895 696 ntBASIC11.98□□□□□ -0.49
Lsm3P62311 Gm21896-201ENSMUST00000186520 696 ntBASIC11.98□□□□□ -0.49
Lsm3P62311 Gm21873-201ENSMUST00000186728 696 ntBASIC11.98□□□□□ -0.49
Lsm3P62311 Gm21794-201ENSMUST00000187056 696 ntBASIC11.98□□□□□ -0.49
Lsm3P62311 Gm21880-201ENSMUST00000187275 696 ntBASIC11.98□□□□□ -0.49
Lsm3P62311 Gm21826-201ENSMUST00000187451 696 ntBASIC11.98□□□□□ -0.49
Lsm3P62311 Gm21198-201ENSMUST00000188393 696 ntBASIC11.98□□□□□ -0.49
Lsm3P62311 Gm21749-201ENSMUST00000189343 696 ntBASIC11.98□□□□□ -0.49
Lsm3P62311 Gm21901-201ENSMUST00000189568 696 ntBASIC11.98□□□□□ -0.49
Lsm3P62311 Gm29424-201ENSMUST00000189716 696 ntBASIC11.98□□□□□ -0.49
Lsm3P62311 Gm28599-201ENSMUST00000189838 694 ntBASIC11.98□□□□□ -0.49
Lsm3P62311 Gm21867-201ENSMUST00000189917 696 ntBASIC11.98□□□□□ -0.49
Lsm3P62311 Gm29269-201ENSMUST00000190087 696 ntBASIC11.98□□□□□ -0.49
Lsm3P62311 Gm21722-201ENSMUST00000190153 696 ntBASIC11.98□□□□□ -0.49
Lsm3P62311 Gm28423-201ENSMUST00000190701 696 ntBASIC11.98□□□□□ -0.49
Lsm3P62311 Gm21899-201ENSMUST00000190745 696 ntBASIC11.98□□□□□ -0.49
Lsm3P62311 Gm21910-201ENSMUST00000191163 696 ntBASIC11.98□□□□□ -0.49
Lsm3P62311 Gm21849-201ENSMUST00000191571 696 ntBASIC11.98□□□□□ -0.49
Lsm3P62311 Gm28678-201ENSMUST00000191593 696 ntBASIC11.98□□□□□ -0.49
Lsm3P62311 Gm20910-201ENSMUST00000193268 696 ntBASIC11.98□□□□□ -0.49
Lsm3P62311 Gm21871-201ENSMUST00000194621 696 ntBASIC11.98□□□□□ -0.49
Lsm3P62311 Gm18669-201ENSMUST00000216049 778 ntBASIC11.98□□□□□ -0.49
Lsm3P62311 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Lsm3P62311 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms