Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Sec61a1P61620 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Sec61a1P61620 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sec61a1P61620 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sec61a1P61620 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sec61a1P61620 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Sec61a1P61620 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sec61a1P61620 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.65□□□□□ -0.54
Sec61a1P61620 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sec61a1P61620 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Sec61a1P61620 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sec61a1P61620 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sec61a1P61620 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sec61a1P61620 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.55
Sec61a1P61620 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Sec61a1P61620 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Sec61a1P61620 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Sec61a1P61620 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Sec61a1P61620 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Sec61a1P61620 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61a1P61620 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61a1P61620 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61a1P61620 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61a1P61620 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.64□□□□□ -0.55
Sec61a1P61620 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61a1P61620 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.64□□□□□ -0.55
Sec61a1P61620 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61a1P61620 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61a1P61620 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Sec61a1P61620 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61a1P61620 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.64□□□□□ -0.55
Sec61a1P61620 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61a1P61620 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Sec61a1P61620 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Sec61a1P61620 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61a1P61620 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61a1P61620 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61a1P61620 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.64□□□□□ -0.55
Sec61a1P61620 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.64□□□□□ -0.55
Sec61a1P61620 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61a1P61620 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61a1P61620 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC11.64□□□□□ -0.55
Sec61a1P61620 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61a1P61620 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.64□□□□□ -0.55
Sec61a1P61620 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61a1P61620 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61a1P61620 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61a1P61620 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61a1P61620 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Sec61a1P61620 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.64□□□□□ -0.55
Sec61a1P61620 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61a1P61620 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61a1P61620 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61a1P61620 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.64□□□□□ -0.55
Sec61a1P61620 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61a1P61620 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61a1P61620 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61a1P61620 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61a1P61620 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.64□□□□□ -0.55
Sec61a1P61620 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Sec61a1P61620 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61a1P61620 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Sec61a1P61620 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61a1P61620 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61a1P61620 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61a1P61620 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sec61a1P61620 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61a1P61620 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61a1P61620 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61a1P61620 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.63□□□□□ -0.55
Sec61a1P61620 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Sec61a1P61620 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Sec61a1P61620 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61a1P61620 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61a1P61620 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61a1P61620 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61a1P61620 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61a1P61620 Gm15393-201ENSMUST00000120499 219 ntBASIC11.63□□□□□ -0.55
Sec61a1P61620 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.63□□□□□ -0.55
Sec61a1P61620 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61a1P61620 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61a1P61620 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.63□□□□□ -0.55
Sec61a1P61620 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61a1P61620 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.63□□□□□ -0.55
Sec61a1P61620 Gm42612-201ENSMUST00000197986 623 ntBASIC11.63□□□□□ -0.55
Sec61a1P61620 Gm43170-201ENSMUST00000199827 612 ntBASIC11.63□□□□□ -0.55
Sec61a1P61620 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.63□□□□□ -0.55
Sec61a1P61620 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.63□□□□□ -0.55
Sec61a1P61620 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61a1P61620 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Sec61a1P61620 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61a1P61620 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61a1P61620 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61a1P61620 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61a1P61620 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61a1P61620 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61a1P61620 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61a1P61620 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61a1P61620 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sec61a1P61620 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms