Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Nphp4P59240 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nphp4P59240 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nphp4P59240 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nphp4P59240 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nphp4P59240 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC17.68■□□□□ 0.42
Nphp4P59240 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nphp4P59240 Gm6015-201ENSMUST00000217493 1586 ntBASIC17.68■□□□□ 0.42
Nphp4P59240 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nphp4P59240 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nphp4P59240 Gm18827-201ENSMUST00000188341 790 ntBASIC17.68■□□□□ 0.42
Nphp4P59240 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC17.68■□□□□ 0.42
Nphp4P59240 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nphp4P59240 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nphp4P59240 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nphp4P59240 Gm45186-201ENSMUST00000206874 478 ntBASIC17.68■□□□□ 0.42
Nphp4P59240 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nphp4P59240 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC17.68■□□□□ 0.42
Nphp4P59240 Gm13097-201ENSMUST00000210722 397 ntBASIC17.68■□□□□ 0.42
Nphp4P59240 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC17.68■□□□□ 0.42
Nphp4P59240 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nphp4P59240 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Nphp4P59240 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nphp4P59240 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nphp4P59240 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nphp4P59240 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nphp4P59240 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC17.68■□□□□ 0.42
Nphp4P59240 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nphp4P59240 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nphp4P59240 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nphp4P59240 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nphp4P59240 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC17.68■□□□□ 0.42
Nphp4P59240 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nphp4P59240 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nphp4P59240 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nphp4P59240 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nphp4P59240 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nphp4P59240 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Nphp4P59240 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nphp4P59240 Gm15703-201ENSMUST00000120250 880 ntBASIC17.67■□□□□ 0.42
Nphp4P59240 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC17.67■□□□□ 0.42
Nphp4P59240 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Nphp4P59240 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC17.67■□□□□ 0.42
Nphp4P59240 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC17.67■□□□□ 0.42
Nphp4P59240 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC17.67■□□□□ 0.42
Nphp4P59240 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC17.67■□□□□ 0.42
Nphp4P59240 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC17.67■□□□□ 0.42
Nphp4P59240 Gm8712-201ENSMUST00000221090 701 ntBASIC17.67■□□□□ 0.42
Nphp4P59240 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Nphp4P59240 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nphp4P59240 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nphp4P59240 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nphp4P59240 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nphp4P59240 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nphp4P59240 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nphp4P59240 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nphp4P59240 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nphp4P59240 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nphp4P59240 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nphp4P59240 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nphp4P59240 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nphp4P59240 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC17.67■□□□□ 0.42
Nphp4P59240 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nphp4P59240 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nphp4P59240 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nphp4P59240 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nphp4P59240 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Nphp4P59240 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Nphp4P59240 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nphp4P59240 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nphp4P59240 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nphp4P59240 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Nphp4P59240 Gm43823-201ENSMUST00000197391 1808 ntBASIC17.67■□□□□ 0.42
Nphp4P59240 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nphp4P59240 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nphp4P59240 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nphp4P59240 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Nphp4P59240 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC17.66■□□□□ 0.42
Nphp4P59240 Gm24845-201ENSMUST00000158034 109 ntBASIC17.66■□□□□ 0.42
Nphp4P59240 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC17.66■□□□□ 0.42
Nphp4P59240 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC17.66■□□□□ 0.42
Nphp4P59240 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nphp4P59240 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nphp4P59240 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nphp4P59240 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Nphp4P59240 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nphp4P59240 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nphp4P59240 Gm5939-201ENSMUST00000119613 2874 ntBASIC17.66■□□□□ 0.42
Nphp4P59240 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nphp4P59240 CT025610.1-201ENSMUST00000224552 1786 ntBASIC17.66■□□□□ 0.42
Nphp4P59240 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nphp4P59240 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nphp4P59240 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nphp4P59240 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nphp4P59240 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nphp4P59240 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Nphp4P59240 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC17.66■□□□□ 0.42
Nphp4P59240 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Nphp4P59240 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nphp4P59240 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms