Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.11□□□□□ -0.31
Atxn1P54254 Gm12566-201ENSMUST00000121479 359 ntBASIC13.11□□□□□ -0.31
Atxn1P54254 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atxn1P54254 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Atxn1P54254 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Atxn1P54254 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Atxn1P54254 Gm37922-201ENSMUST00000195596 455 ntBASIC13.11□□□□□ -0.31
Atxn1P54254 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC13.11□□□□□ -0.31
Atxn1P54254 Gm45186-201ENSMUST00000206874 478 ntBASIC13.11□□□□□ -0.31
Atxn1P54254 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Atxn1P54254 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atxn1P54254 Mir497b-201ENSMUST00000093601 125 ntBASIC13.11□□□□□ -0.31
Atxn1P54254 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atxn1P54254 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Atxn1P54254 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Atxn1P54254 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atxn1P54254 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atxn1P54254 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atxn1P54254 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atxn1P54254 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.11□□□□□ -0.31
Atxn1P54254 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atxn1P54254 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atxn1P54254 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atxn1P54254 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atxn1P54254 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atxn1P54254 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Atxn1P54254 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atxn1P54254 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atxn1P54254 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atxn1P54254 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atxn1P54254 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atxn1P54254 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Atxn1P54254 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atxn1P54254 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atxn1P54254 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atxn1P54254 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atxn1P54254 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atxn1P54254 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atxn1P54254 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atxn1P54254 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Atxn1P54254 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.1□□□□□ -0.31
Atxn1P54254 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.1□□□□□ -0.31
Atxn1P54254 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atxn1P54254 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.1□□□□□ -0.31
Atxn1P54254 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Atxn1P54254 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC13.1□□□□□ -0.31
Atxn1P54254 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.1□□□□□ -0.31
Atxn1P54254 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.1□□□□□ -0.31
Atxn1P54254 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.1□□□□□ -0.31
Atxn1P54254 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atxn1P54254 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atxn1P54254 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.1□□□□□ -0.31
Atxn1P54254 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.1□□□□□ -0.31
Atxn1P54254 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.1□□□□□ -0.31
Atxn1P54254 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Atxn1P54254 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Atxn1P54254 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Atxn1P54254 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atxn1P54254 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atxn1P54254 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atxn1P54254 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atxn1P54254 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atxn1P54254 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atxn1P54254 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.1□□□□□ -0.31
Atxn1P54254 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.1□□□□□ -0.31
Atxn1P54254 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atxn1P54254 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.1□□□□□ -0.31
Atxn1P54254 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atxn1P54254 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.1□□□□□ -0.31
Atxn1P54254 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Atxn1P54254 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn1P54254 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn1P54254 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn1P54254 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Atxn1P54254 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn1P54254 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn1P54254 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn1P54254 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Atxn1P54254 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Atxn1P54254 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.09□□□□□ -0.31
Atxn1P54254 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn1P54254 Mospd4-201ENSMUST00000180618 576 ntBASIC13.09□□□□□ -0.31
Atxn1P54254 Gm2260-201ENSMUST00000184965 657 ntBASIC13.09□□□□□ -0.31
Atxn1P54254 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC13.09□□□□□ -0.31
Atxn1P54254 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC13.09□□□□□ -0.31
Atxn1P54254 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.09□□□□□ -0.31
Atxn1P54254 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn1P54254 Gm19208-201ENSMUST00000213861 912 ntBASIC13.09□□□□□ -0.31
Atxn1P54254 CT009718.3-201ENSMUST00000221116 367 ntBASIC13.09□□□□□ -0.31
Atxn1P54254 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.09□□□□□ -0.31
Atxn1P54254 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn1P54254 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn1P54254 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Atxn1P54254 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn1P54254 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn1P54254 Gm24447-201ENSMUST00000083977 338 ntBASIC13.09□□□□□ -0.31
Atxn1P54254 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Atxn1P54254 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.09□□□□□ -0.31
Atxn1P54254 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn1P54254 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms