Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cux1P53564 Gm11405-201ENSMUST00000118689 1556 ntBASIC19.95■□□□□ 0.78
Cux1P53564 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cux1P53564 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cux1P53564 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cux1P53564 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cux1P53564 Gm45242-201ENSMUST00000210666 2129 ntBASIC19.95■□□□□ 0.78
Cux1P53564 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC19.95■□□□□ 0.78
Cux1P53564 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
Cux1P53564 Gm12201-201ENSMUST00000120657 1234 ntBASIC19.95■□□□□ 0.78
Cux1P53564 Gm18734-201ENSMUST00000172937 808 ntBASIC19.95■□□□□ 0.78
Cux1P53564 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC19.95■□□□□ 0.78
Cux1P53564 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Cux1P53564 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cux1P53564 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cux1P53564 Gm45598-202ENSMUST00000210719 986 ntBASIC19.95■□□□□ 0.78
Cux1P53564 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cux1P53564 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Cux1P53564 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC19.95■□□□□ 0.78
Cux1P53564 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Cux1P53564 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cux1P53564 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cux1P53564 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cux1P53564 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cux1P53564 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
Cux1P53564 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Cux1P53564 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cux1P53564 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cux1P53564 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cux1P53564 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cux1P53564 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cux1P53564 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cux1P53564 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Cux1P53564 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cux1P53564 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cux1P53564 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cux1P53564 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Cux1P53564 Mir1943-201ENSMUST00000158276 73 ntBASIC19.94■□□□□ 0.78
Cux1P53564 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC19.94■□□□□ 0.78
Cux1P53564 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cux1P53564 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC19.94■□□□□ 0.78
Cux1P53564 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cux1P53564 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Cux1P53564 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC19.94■□□□□ 0.78
Cux1P53564 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC19.94■□□□□ 0.78
Cux1P53564 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cux1P53564 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Cux1P53564 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cux1P53564 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cux1P53564 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cux1P53564 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cux1P53564 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cux1P53564 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Cux1P53564 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC19.93■□□□□ 0.78
Cux1P53564 Gm45433-201ENSMUST00000209386 247 ntBASIC19.93■□□□□ 0.78
Cux1P53564 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cux1P53564 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Cux1P53564 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC19.93■□□□□ 0.78
Cux1P53564 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cux1P53564 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cux1P53564 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
Cux1P53564 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Cux1P53564 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cux1P53564 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Cux1P53564 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC19.93■□□□□ 0.78
Cux1P53564 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cux1P53564 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Cux1P53564 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Cux1P53564 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cux1P53564 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC19.92■□□□□ 0.78
Cux1P53564 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
Cux1P53564 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cux1P53564 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Cux1P53564 Gm10312-201ENSMUST00000078515 489 ntBASIC19.92■□□□□ 0.78
Cux1P53564 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Cux1P53564 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cux1P53564 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cux1P53564 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cux1P53564 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cux1P53564 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cux1P53564 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cux1P53564 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Cux1P53564 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cux1P53564 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Cux1P53564 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
Cux1P53564 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC19.92■□□□□ 0.78
Cux1P53564 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC19.92■□□□□ 0.78
Cux1P53564 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cux1P53564 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cux1P53564 Gm32999-201ENSMUST00000192693 562 ntBASIC19.92■□□□□ 0.78
Cux1P53564 Gm17812-201ENSMUST00000204935 318 ntBASIC19.92■□□□□ 0.78
Cux1P53564 AC166344.1-202ENSMUST00000224139 234 ntBASIC19.92■□□□□ 0.78
Cux1P53564 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cux1P53564 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cux1P53564 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cux1P53564 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC19.91■□□□□ 0.78
Cux1P53564 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cux1P53564 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cux1P53564 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cux1P53564 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms