Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Gm43273-201ENSMUST00000199649 2594 ntBASIC10.93□□□□□ -0.66
Nkx2-1P50220 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Pck2-205ENSMUST00000226352 2784 ntBASIC10.93□□□□□ -0.66
Nkx2-1P50220 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Gm22065-201ENSMUST00000103753 110 ntBASIC10.93□□□□□ -0.66
Nkx2-1P50220 Gm22066-201ENSMUST00000103761 110 ntBASIC10.93□□□□□ -0.66
Nkx2-1P50220 Gm24932-201ENSMUST00000103763 110 ntBASIC10.93□□□□□ -0.66
Nkx2-1P50220 Gm24115-201ENSMUST00000103799 110 ntBASIC10.93□□□□□ -0.66
Nkx2-1P50220 Gm22190-201ENSMUST00000103827 110 ntBASIC10.93□□□□□ -0.66
Nkx2-1P50220 Gm22191-201ENSMUST00000103831 110 ntBASIC10.93□□□□□ -0.66
Nkx2-1P50220 Gm24721-201ENSMUST00000103849 110 ntBASIC10.93□□□□□ -0.66
Nkx2-1P50220 Gm28018-201ENSMUST00000103869 110 ntBASIC10.93□□□□□ -0.66
Nkx2-1P50220 Gm26399-201ENSMUST00000103937 110 ntBASIC10.93□□□□□ -0.66
Nkx2-1P50220 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Gm24158-201ENSMUST00000175263 71 ntBASIC10.93□□□□□ -0.66
Nkx2-1P50220 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Gm25349-201ENSMUST00000177728 110 ntBASIC10.93□□□□□ -0.66
Nkx2-1P50220 Gm23616-201ENSMUST00000177797 110 ntBASIC10.93□□□□□ -0.66
Nkx2-1P50220 Gm25871-201ENSMUST00000177816 110 ntBASIC10.93□□□□□ -0.66
Nkx2-1P50220 Gm24752-201ENSMUST00000178240 110 ntBASIC10.93□□□□□ -0.66
Nkx2-1P50220 Gm24496-201ENSMUST00000178287 110 ntBASIC10.93□□□□□ -0.66
Nkx2-1P50220 Gm25649-201ENSMUST00000178476 110 ntBASIC10.93□□□□□ -0.66
Nkx2-1P50220 Gm25548-201ENSMUST00000178681 110 ntBASIC10.93□□□□□ -0.66
Nkx2-1P50220 Gm23147-201ENSMUST00000178841 110 ntBASIC10.93□□□□□ -0.66
Nkx2-1P50220 Gm26095-201ENSMUST00000179270 110 ntBASIC10.93□□□□□ -0.66
Nkx2-1P50220 Gm22171-201ENSMUST00000179283 110 ntBASIC10.93□□□□□ -0.66
Nkx2-1P50220 Gm23936-201ENSMUST00000179354 110 ntBASIC10.93□□□□□ -0.66
Nkx2-1P50220 Gm22619-201ENSMUST00000179516 110 ntBASIC10.93□□□□□ -0.66
Nkx2-1P50220 Gm25255-201ENSMUST00000179579 110 ntBASIC10.93□□□□□ -0.66
Nkx2-1P50220 Gm24755-201ENSMUST00000179691 110 ntBASIC10.93□□□□□ -0.66
Nkx2-1P50220 Gm26506-201ENSMUST00000179692 110 ntBASIC10.93□□□□□ -0.66
Nkx2-1P50220 Gm25086-201ENSMUST00000179931 110 ntBASIC10.93□□□□□ -0.66
Nkx2-1P50220 Gm23243-201ENSMUST00000180047 110 ntBASIC10.93□□□□□ -0.66
Nkx2-1P50220 Gm24659-201ENSMUST00000180212 110 ntBASIC10.93□□□□□ -0.66
Nkx2-1P50220 Gm24169-201ENSMUST00000180244 110 ntBASIC10.93□□□□□ -0.66
Nkx2-1P50220 Gm23689-201ENSMUST00000180354 110 ntBASIC10.93□□□□□ -0.66
Nkx2-1P50220 Mir7221-201ENSMUST00000184009 72 ntBASIC10.93□□□□□ -0.66
Nkx2-1P50220 Gm27359-201ENSMUST00000184153 110 ntBASIC10.93□□□□□ -0.66
Nkx2-1P50220 Gm27785-201ENSMUST00000184268 110 ntBASIC10.93□□□□□ -0.66
Nkx2-1P50220 Gm27466-201ENSMUST00000184396 110 ntBASIC10.93□□□□□ -0.66
Nkx2-1P50220 Gm27703-201ENSMUST00000184836 110 ntBASIC10.93□□□□□ -0.66
Nkx2-1P50220 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC10.93□□□□□ -0.66
Nkx2-1P50220 AC121804.3-201ENSMUST00000223420 295 ntBASIC10.93□□□□□ -0.66
Nkx2-1P50220 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nkx2-1P50220 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nkx2-1P50220 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms