Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Rfx1P48377 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfx1P48377 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Rfx1P48377 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rfx1P48377 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfx1P48377 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfx1P48377 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC15.76■□□□□ 0.11
Rfx1P48377 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfx1P48377 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfx1P48377 Gm15240-201ENSMUST00000118156 720 ntBASIC15.76■□□□□ 0.11
Rfx1P48377 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rfx1P48377 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC15.76■□□□□ 0.11
Rfx1P48377 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rfx1P48377 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.76■□□□□ 0.11
Rfx1P48377 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.76■□□□□ 0.11
Rfx1P48377 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rfx1P48377 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.76■□□□□ 0.11
Rfx1P48377 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.76■□□□□ 0.11
Rfx1P48377 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.76■□□□□ 0.11
Rfx1P48377 AC154846.1-201ENSMUST00000226278 862 ntBASIC15.76■□□□□ 0.11
Rfx1P48377 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Rfx1P48377 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfx1P48377 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfx1P48377 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfx1P48377 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfx1P48377 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Rfx1P48377 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfx1P48377 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfx1P48377 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfx1P48377 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfx1P48377 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfx1P48377 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfx1P48377 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rfx1P48377 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfx1P48377 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfx1P48377 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rfx1P48377 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC15.76■□□□□ 0.11
Rfx1P48377 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rfx1P48377 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Rfx1P48377 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Rfx1P48377 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Rfx1P48377 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rfx1P48377 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rfx1P48377 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC15.75■□□□□ 0.11
Rfx1P48377 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rfx1P48377 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC15.75■□□□□ 0.11
Rfx1P48377 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rfx1P48377 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rfx1P48377 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
Rfx1P48377 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.75■□□□□ 0.11
Rfx1P48377 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rfx1P48377 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.75■□□□□ 0.11
Rfx1P48377 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rfx1P48377 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rfx1P48377 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rfx1P48377 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rfx1P48377 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Rfx1P48377 Gm43463-201ENSMUST00000195967 1803 ntBASIC15.75■□□□□ 0.11
Rfx1P48377 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rfx1P48377 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rfx1P48377 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rfx1P48377 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rfx1P48377 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rfx1P48377 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rfx1P48377 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rfx1P48377 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rfx1P48377 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rfx1P48377 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rfx1P48377 Gm37015-201ENSMUST00000192763 1521 ntBASIC15.74■□□□□ 0.11
Rfx1P48377 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rfx1P48377 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Rfx1P48377 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rfx1P48377 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rfx1P48377 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC15.74■□□□□ 0.11
Rfx1P48377 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rfx1P48377 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rfx1P48377 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rfx1P48377 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.74■□□□□ 0.11
Rfx1P48377 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.74■□□□□ 0.11
Rfx1P48377 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.74■□□□□ 0.11
Rfx1P48377 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.74■□□□□ 0.11
Rfx1P48377 Gm12403-201ENSMUST00000121384 959 ntBASIC15.74■□□□□ 0.11
Rfx1P48377 Gm11434-201ENSMUST00000122379 629 ntBASIC15.74■□□□□ 0.11
Rfx1P48377 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.74■□□□□ 0.11
Rfx1P48377 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC15.74■□□□□ 0.11
Rfx1P48377 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC15.74■□□□□ 0.11
Rfx1P48377 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.74■□□□□ 0.11
Rfx1P48377 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.74■□□□□ 0.11
Rfx1P48377 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.74■□□□□ 0.11
Rfx1P48377 Gm4335-201ENSMUST00000182581 1004 ntBASIC15.74■□□□□ 0.11
Rfx1P48377 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Rfx1P48377 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC15.74■□□□□ 0.11
Rfx1P48377 Chchd1-203ENSMUST00000224633 557 ntBASIC15.74■□□□□ 0.11
Rfx1P48377 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rfx1P48377 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rfx1P48377 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rfx1P48377 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rfx1P48377 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rfx1P48377 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rfx1P48377 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 134.1 ms