Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx2-6P43688 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx2-6P43688 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Nkx2-6P43688 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx2-6P43688 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx2-6P43688 Gm27501-201ENSMUST00000183599 107 ntBASIC12.49□□□□□ -0.41
Nkx2-6P43688 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.49□□□□□ -0.41
Nkx2-6P43688 Gm38266-201ENSMUST00000194931 421 ntBASIC12.49□□□□□ -0.41
Nkx2-6P43688 Gm43133-201ENSMUST00000197472 463 ntBASIC12.49□□□□□ -0.41
Nkx2-6P43688 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.49□□□□□ -0.41
Nkx2-6P43688 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx2-6P43688 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx2-6P43688 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.49□□□□□ -0.41
Nkx2-6P43688 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.49□□□□□ -0.41
Nkx2-6P43688 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Nkx2-6P43688 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx2-6P43688 Olfr582-201ENSMUST00000098212 960 ntBASIC12.49□□□□□ -0.41
Nkx2-6P43688 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx2-6P43688 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx2-6P43688 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx2-6P43688 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx2-6P43688 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Nkx2-6P43688 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx2-6P43688 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx2-6P43688 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx2-6P43688 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx2-6P43688 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.49□□□□□ -0.41
Nkx2-6P43688 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nkx2-6P43688 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Nkx2-6P43688 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Gm11793-201ENSMUST00000120433 981 ntBASIC12.48□□□□□ -0.41
Nkx2-6P43688 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.48□□□□□ -0.41
Nkx2-6P43688 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Nkx2-6P43688 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Gm25261-201ENSMUST00000157416 134 ntBASIC12.48□□□□□ -0.41
Nkx2-6P43688 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Nkx2-6P43688 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Nkx2-6P43688 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nkx2-6P43688 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-6P43688 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Nkx2-6P43688 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-6P43688 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-6P43688 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.47□□□□□ -0.41
Nkx2-6P43688 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-6P43688 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-6P43688 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Nkx2-6P43688 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-6P43688 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nkx2-6P43688 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms