Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chd1P40201 Gm22877-201ENSMUST00000175451 105 ntBASIC19.34■□□□□ 0.69
Chd1P40201 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC19.34■□□□□ 0.69
Chd1P40201 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC19.34■□□□□ 0.69
Chd1P40201 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chd1P40201 Gm8894-201ENSMUST00000074642 666 ntBASIC19.34■□□□□ 0.69
Chd1P40201 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chd1P40201 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chd1P40201 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chd1P40201 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chd1P40201 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chd1P40201 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chd1P40201 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chd1P40201 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chd1P40201 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chd1P40201 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chd1P40201 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Chd1P40201 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chd1P40201 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC19.34■□□□□ 0.69
Chd1P40201 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Chd1P40201 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Chd1P40201 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Chd1P40201 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Chd1P40201 Gm44270-201ENSMUST00000203084 1234 ntBASIC19.34■□□□□ 0.69
Chd1P40201 Gm44958-201ENSMUST00000203734 736 ntBASIC19.34■□□□□ 0.69
Chd1P40201 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Chd1P40201 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC19.34■□□□□ 0.69
Chd1P40201 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chd1P40201 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Chd1P40201 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chd1P40201 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chd1P40201 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC19.33■□□□□ 0.69
Chd1P40201 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chd1P40201 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chd1P40201 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Chd1P40201 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chd1P40201 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Chd1P40201 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chd1P40201 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Chd1P40201 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Chd1P40201 Mir6923-201ENSMUST00000184592 72 ntBASIC19.33■□□□□ 0.68
Chd1P40201 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC19.33■□□□□ 0.68
Chd1P40201 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chd1P40201 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chd1P40201 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
Chd1P40201 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC19.33■□□□□ 0.68
Chd1P40201 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Chd1P40201 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chd1P40201 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Chd1P40201 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Chd1P40201 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chd1P40201 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Chd1P40201 Gm4782-201ENSMUST00000168705 2046 ntBASIC19.32■□□□□ 0.68
Chd1P40201 Gm13916-201ENSMUST00000117368 628 ntBASIC19.32■□□□□ 0.68
Chd1P40201 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC19.32■□□□□ 0.68
Chd1P40201 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chd1P40201 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chd1P40201 Gm45342-201ENSMUST00000210903 1363 ntBASIC19.32■□□□□ 0.68
Chd1P40201 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chd1P40201 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC19.32■□□□□ 0.68
Chd1P40201 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chd1P40201 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Chd1P40201 Gm2420-202ENSMUST00000202224 2249 ntBASIC19.32■□□□□ 0.68
Chd1P40201 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Chd1P40201 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chd1P40201 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chd1P40201 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chd1P40201 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chd1P40201 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chd1P40201 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chd1P40201 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chd1P40201 Gm25076-201ENSMUST00000104098 132 ntBASIC19.31■□□□□ 0.68
Chd1P40201 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chd1P40201 Gm12990-201ENSMUST00000120372 468 ntBASIC19.31■□□□□ 0.68
Chd1P40201 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC19.31■□□□□ 0.68
Chd1P40201 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Chd1P40201 Gm17877-201ENSMUST00000192578 814 ntBASIC19.31■□□□□ 0.68
Chd1P40201 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC19.31■□□□□ 0.68
Chd1P40201 Gm2875-201ENSMUST00000211333 360 ntBASIC19.31■□□□□ 0.68
Chd1P40201 AC166344.1-201ENSMUST00000223745 674 ntBASIC19.31■□□□□ 0.68
Chd1P40201 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chd1P40201 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chd1P40201 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC19.31■□□□□ 0.68
Chd1P40201 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chd1P40201 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Chd1P40201 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Chd1P40201 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chd1P40201 Gm5847-201ENSMUST00000178959 1595 ntBASIC19.31■□□□□ 0.68
Chd1P40201 Gm15784-201ENSMUST00000120260 1462 ntBASIC19.31■□□□□ 0.68
Chd1P40201 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC19.31■□□□□ 0.68
Chd1P40201 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC19.31■□□□□ 0.68
Chd1P40201 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chd1P40201 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chd1P40201 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chd1P40201 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC19.31■□□□□ 0.68
Chd1P40201 Gm14219-201ENSMUST00000120414 288 ntBASIC19.31■□□□□ 0.68
Chd1P40201 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chd1P40201 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Chd1P40201 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Chd1P40201 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms