Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LdlrP35951 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LdlrP35951 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LdlrP35951 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
LdlrP35951 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LdlrP35951 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LdlrP35951 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LdlrP35951 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.16□□□□□ -0.3
LdlrP35951 Gm15393-201ENSMUST00000120499 219 ntBASIC13.16□□□□□ -0.3
LdlrP35951 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.16□□□□□ -0.3
LdlrP35951 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LdlrP35951 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LdlrP35951 Mir7221-201ENSMUST00000184009 72 ntBASIC13.16□□□□□ -0.3
LdlrP35951 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.16□□□□□ -0.3
LdlrP35951 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LdlrP35951 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LdlrP35951 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LdlrP35951 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.16□□□□□ -0.3
LdlrP35951 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LdlrP35951 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LdlrP35951 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
LdlrP35951 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LdlrP35951 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LdlrP35951 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.16□□□□□ -0.3
LdlrP35951 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
LdlrP35951 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.16□□□□□ -0.3
LdlrP35951 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LdlrP35951 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LdlrP35951 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
LdlrP35951 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.15□□□□□ -0.3
LdlrP35951 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LdlrP35951 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
LdlrP35951 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LdlrP35951 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LdlrP35951 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.15□□□□□ -0.3
LdlrP35951 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LdlrP35951 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
LdlrP35951 Gm6266-201ENSMUST00000203844 806 ntBASIC13.15□□□□□ -0.3
LdlrP35951 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
LdlrP35951 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LdlrP35951 Gm18624-201ENSMUST00000220966 658 ntBASIC13.15□□□□□ -0.3
LdlrP35951 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
LdlrP35951 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LdlrP35951 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LdlrP35951 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LdlrP35951 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
LdlrP35951 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LdlrP35951 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LdlrP35951 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
LdlrP35951 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
LdlrP35951 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
LdlrP35951 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LdlrP35951 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LdlrP35951 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LdlrP35951 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
LdlrP35951 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LdlrP35951 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LdlrP35951 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.15□□□□□ -0.3
LdlrP35951 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LdlrP35951 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.14□□□□□ -0.31
LdlrP35951 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.14□□□□□ -0.31
LdlrP35951 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
LdlrP35951 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.14□□□□□ -0.31
LdlrP35951 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LdlrP35951 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.14□□□□□ -0.31
LdlrP35951 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LdlrP35951 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LdlrP35951 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
LdlrP35951 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.14□□□□□ -0.31
LdlrP35951 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LdlrP35951 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.14□□□□□ -0.31
LdlrP35951 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.14□□□□□ -0.31
LdlrP35951 Mir1938-201ENSMUST00000158746 100 ntBASIC13.14□□□□□ -0.31
LdlrP35951 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.14□□□□□ -0.31
LdlrP35951 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LdlrP35951 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.14□□□□□ -0.31
LdlrP35951 Gm5425-201ENSMUST00000214125 459 ntBASIC13.14□□□□□ -0.31
LdlrP35951 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
LdlrP35951 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LdlrP35951 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.14□□□□□ -0.31
LdlrP35951 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LdlrP35951 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
LdlrP35951 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LdlrP35951 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LdlrP35951 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LdlrP35951 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LdlrP35951 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.14□□□□□ -0.31
LdlrP35951 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LdlrP35951 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LdlrP35951 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LdlrP35951 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LdlrP35951 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LdlrP35951 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LdlrP35951 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
LdlrP35951 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LdlrP35951 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LdlrP35951 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LdlrP35951 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
LdlrP35951 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
LdlrP35951 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms