Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vcam1P29533 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vcam1P29533 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vcam1P29533 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC15.09■□□□□ 0.01
Vcam1P29533 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vcam1P29533 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vcam1P29533 Daam2-202ENSMUST00000224595 1926 ntBASIC15.09■□□□□ 0.01
Vcam1P29533 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Vcam1P29533 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Vcam1P29533 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.09■□□□□ 0.01
Vcam1P29533 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vcam1P29533 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.09■□□□□ 0.01
Vcam1P29533 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Vcam1P29533 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vcam1P29533 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Vcam1P29533 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Vcam1P29533 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.08■□□□□ 0.01
Vcam1P29533 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vcam1P29533 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vcam1P29533 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vcam1P29533 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vcam1P29533 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vcam1P29533 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Vcam1P29533 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vcam1P29533 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.08■□□□□ 0
Vcam1P29533 AC167669.2-201ENSMUST00000224417 1620 ntBASIC15.08■□□□□ 0
Vcam1P29533 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vcam1P29533 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC15.08■□□□□ 0
Vcam1P29533 Gm11531-201ENSMUST00000117614 555 ntBASIC15.08■□□□□ 0
Vcam1P29533 Gm13875-201ENSMUST00000120162 282 ntBASIC15.08■□□□□ 0
Vcam1P29533 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC15.08■□□□□ 0
Vcam1P29533 Gm25668-201ENSMUST00000157700 129 ntBASIC15.08■□□□□ 0
Vcam1P29533 Gm23363-201ENSMUST00000175024 79 ntBASIC15.08■□□□□ 0
Vcam1P29533 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC15.08■□□□□ 0
Vcam1P29533 Gm29199-201ENSMUST00000187766 775 ntBASIC15.08■□□□□ 0
Vcam1P29533 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC15.08■□□□□ 0
Vcam1P29533 Gm5950-201ENSMUST00000213337 772 ntBASIC15.08■□□□□ 0
Vcam1P29533 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC15.08■□□□□ 0
Vcam1P29533 Gm9004-201ENSMUST00000218739 1222 ntBASIC15.08■□□□□ 0
Vcam1P29533 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC15.08■□□□□ 0
Vcam1P29533 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vcam1P29533 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Vcam1P29533 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vcam1P29533 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vcam1P29533 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC15.08■□□□□ 0
Vcam1P29533 Gm4366-201ENSMUST00000201488 1342 ntBASIC15.08■□□□□ 0
Vcam1P29533 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vcam1P29533 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Vcam1P29533 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Vcam1P29533 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC15.08■□□□□ 0
Vcam1P29533 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.08■□□□□ 0
Vcam1P29533 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC15.08■□□□□ 0
Vcam1P29533 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Vcam1P29533 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.08■□□□□ 0
Vcam1P29533 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Vcam1P29533 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Vcam1P29533 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.07■□□□□ 0
Vcam1P29533 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Vcam1P29533 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Vcam1P29533 Gm9025-201ENSMUST00000122415 1575 ntBASIC15.07■□□□□ 0
Vcam1P29533 AC113060.1-201ENSMUST00000225689 1573 ntBASIC15.07■□□□□ 0
Vcam1P29533 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vcam1P29533 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Vcam1P29533 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vcam1P29533 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC15.07■□□□□ 0
Vcam1P29533 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC15.07■□□□□ 0
Vcam1P29533 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vcam1P29533 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vcam1P29533 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC15.07■□□□□ 0
Vcam1P29533 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Vcam1P29533 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC15.07■□□□□ 0
Vcam1P29533 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC15.07■□□□□ 0
Vcam1P29533 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC15.07■□□□□ 0
Vcam1P29533 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC15.07■□□□□ 0
Vcam1P29533 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC15.07■□□□□ 0
Vcam1P29533 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vcam1P29533 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vcam1P29533 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vcam1P29533 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC15.07■□□□□ 0
Vcam1P29533 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vcam1P29533 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Vcam1P29533 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC15.07■□□□□ 0
Vcam1P29533 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vcam1P29533 Gm19221-201ENSMUST00000221827 1477 ntBASIC15.07■□□□□ 0
Vcam1P29533 Gm37827-201ENSMUST00000194486 1542 ntBASIC15.07■□□□□ 0
Vcam1P29533 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vcam1P29533 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.07■□□□□ 0
Vcam1P29533 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Vcam1P29533 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Vcam1P29533 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Vcam1P29533 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vcam1P29533 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Vcam1P29533 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vcam1P29533 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vcam1P29533 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vcam1P29533 Gm15459-201ENSMUST00000117405 1941 ntBASIC15.06■□□□□ 0
Vcam1P29533 Gm8355-201ENSMUST00000177767 1941 ntBASIC15.06■□□□□ 0
Vcam1P29533 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC15.06■□□□□ 0
Vcam1P29533 Mir874-201ENSMUST00000104769 76 ntBASIC15.06■□□□□ 0
Vcam1P29533 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms