Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cd40lgP27548 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cd40lgP27548 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cd40lgP27548 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Cd40lgP27548 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cd40lgP27548 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cd40lgP27548 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cd40lgP27548 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cd40lgP27548 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Cd40lgP27548 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Cd40lgP27548 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.21□□□□□ -0.45
Cd40lgP27548 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.21□□□□□ -0.45
Cd40lgP27548 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cd40lgP27548 Gm26464-201ENSMUST00000157094 305 ntBASIC12.21□□□□□ -0.45
Cd40lgP27548 Gm9002-201ENSMUST00000178437 499 ntBASIC12.21□□□□□ -0.45
Cd40lgP27548 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.21□□□□□ -0.45
Cd40lgP27548 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.21□□□□□ -0.45
Cd40lgP27548 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cd40lgP27548 Gm18041-201ENSMUST00000218210 618 ntBASIC12.21□□□□□ -0.45
Cd40lgP27548 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.21□□□□□ -0.45
Cd40lgP27548 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cd40lgP27548 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.21□□□□□ -0.45
Cd40lgP27548 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cd40lgP27548 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cd40lgP27548 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cd40lgP27548 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cd40lgP27548 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Cd40lgP27548 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cd40lgP27548 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cd40lgP27548 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.45
Cd40lgP27548 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cd40lgP27548 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Cd40lgP27548 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.21□□□□□ -0.46
Cd40lgP27548 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Cd40lgP27548 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cd40lgP27548 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cd40lgP27548 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Cd40lgP27548 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cd40lgP27548 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cd40lgP27548 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cd40lgP27548 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.21□□□□□ -0.46
Cd40lgP27548 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cd40lgP27548 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cd40lgP27548 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
Cd40lgP27548 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Cd40lgP27548 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cd40lgP27548 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Cd40lgP27548 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cd40lgP27548 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.21□□□□□ -0.46
Cd40lgP27548 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cd40lgP27548 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd40lgP27548 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd40lgP27548 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd40lgP27548 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cd40lgP27548 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Cd40lgP27548 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd40lgP27548 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd40lgP27548 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cd40lgP27548 Gm15429-201ENSMUST00000151268 798 ntBASIC12.2□□□□□ -0.46
Cd40lgP27548 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.2□□□□□ -0.46
Cd40lgP27548 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd40lgP27548 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd40lgP27548 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Cd40lgP27548 Gm5161-201ENSMUST00000075243 853 ntBASIC12.2□□□□□ -0.46
Cd40lgP27548 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.2□□□□□ -0.46
Cd40lgP27548 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cd40lgP27548 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd40lgP27548 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd40lgP27548 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cd40lgP27548 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd40lgP27548 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd40lgP27548 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Cd40lgP27548 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cd40lgP27548 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Cd40lgP27548 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd40lgP27548 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.2□□□□□ -0.46
Cd40lgP27548 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cd40lgP27548 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.2□□□□□ -0.46
Cd40lgP27548 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd40lgP27548 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.2□□□□□ -0.46
Cd40lgP27548 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cd40lgP27548 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cd40lgP27548 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd40lgP27548 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cd40lgP27548 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd40lgP27548 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cd40lgP27548 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.19□□□□□ -0.46
Cd40lgP27548 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd40lgP27548 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cd40lgP27548 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd40lgP27548 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd40lgP27548 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Cd40lgP27548 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cd40lgP27548 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd40lgP27548 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd40lgP27548 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.19□□□□□ -0.46
Cd40lgP27548 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd40lgP27548 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd40lgP27548 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cd40lgP27548 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms