Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Cd40P27512 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.94□□□□□ -0.5
Cd40P27512 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.94□□□□□ -0.5
Cd40P27512 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.94□□□□□ -0.5
Cd40P27512 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cd40P27512 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Cd40P27512 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cd40P27512 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cd40P27512 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cd40P27512 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cd40P27512 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cd40P27512 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.94□□□□□ -0.5
Cd40P27512 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Cd40P27512 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Cd40P27512 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cd40P27512 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cd40P27512 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cd40P27512 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cd40P27512 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.94□□□□□ -0.5
Cd40P27512 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cd40P27512 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Cd40P27512 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.94□□□□□ -0.5
Cd40P27512 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cd40P27512 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cd40P27512 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cd40P27512 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cd40P27512 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.93□□□□□ -0.5
Cd40P27512 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.93□□□□□ -0.5
Cd40P27512 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cd40P27512 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.93□□□□□ -0.5
Cd40P27512 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cd40P27512 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cd40P27512 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cd40P27512 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cd40P27512 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cd40P27512 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.93□□□□□ -0.5
Cd40P27512 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cd40P27512 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cd40P27512 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cd40P27512 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.93□□□□□ -0.5
Cd40P27512 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.93□□□□□ -0.5
Cd40P27512 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.93□□□□□ -0.5
Cd40P27512 Gm10012-201ENSMUST00000078252 192 ntBASIC11.93□□□□□ -0.5
Cd40P27512 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cd40P27512 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cd40P27512 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cd40P27512 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cd40P27512 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cd40P27512 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.93□□□□□ -0.5
Cd40P27512 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Cd40P27512 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cd40P27512 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cd40P27512 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cd40P27512 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cd40P27512 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.93□□□□□ -0.5
Cd40P27512 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Cd40P27512 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.93□□□□□ -0.5
Cd40P27512 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cd40P27512 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cd40P27512 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cd40P27512 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40P27512 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.92□□□□□ -0.5
Cd40P27512 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40P27512 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40P27512 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40P27512 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.92□□□□□ -0.5
Cd40P27512 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40P27512 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40P27512 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40P27512 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.92□□□□□ -0.5
Cd40P27512 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40P27512 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Cd40P27512 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Cd40P27512 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40P27512 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.92□□□□□ -0.5
Cd40P27512 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Cd40P27512 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40P27512 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40P27512 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40P27512 Gm11803-201ENSMUST00000119966 444 ntBASIC11.92□□□□□ -0.5
Cd40P27512 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.92□□□□□ -0.5
Cd40P27512 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40P27512 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.92□□□□□ -0.5
Cd40P27512 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40P27512 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.92□□□□□ -0.5
Cd40P27512 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.92□□□□□ -0.5
Cd40P27512 Gm5035-201ENSMUST00000215581 927 ntBASIC11.92□□□□□ -0.5
Cd40P27512 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.92□□□□□ -0.5
Cd40P27512 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40P27512 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40P27512 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40P27512 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40P27512 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.92□□□□□ -0.5
Cd40P27512 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40P27512 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40P27512 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40P27512 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Cd40P27512 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40P27512 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cd40P27512 Gm37019-201ENSMUST00000192133 2134 ntBASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms