Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
BdnfP21237 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
BdnfP21237 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
BdnfP21237 Gm15770-201ENSMUST00000117498 584 ntBASIC12.69□□□□□ -0.38
BdnfP21237 Gm24420-201ENSMUST00000176676 59 ntBASIC12.69□□□□□ -0.38
BdnfP21237 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.69□□□□□ -0.38
BdnfP21237 AC159376.1-201ENSMUST00000218504 630 ntBASIC12.69□□□□□ -0.38
BdnfP21237 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.69□□□□□ -0.38
BdnfP21237 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.69□□□□□ -0.38
BdnfP21237 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
BdnfP21237 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
BdnfP21237 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
BdnfP21237 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.69□□□□□ -0.38
BdnfP21237 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
BdnfP21237 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
BdnfP21237 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
BdnfP21237 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
BdnfP21237 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
BdnfP21237 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
BdnfP21237 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
BdnfP21237 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
BdnfP21237 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
BdnfP21237 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
BdnfP21237 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
BdnfP21237 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
BdnfP21237 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
BdnfP21237 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
BdnfP21237 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
BdnfP21237 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
BdnfP21237 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
BdnfP21237 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
BdnfP21237 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
BdnfP21237 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.68□□□□□ -0.38
BdnfP21237 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.68□□□□□ -0.38
BdnfP21237 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.68□□□□□ -0.38
BdnfP21237 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BdnfP21237 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
BdnfP21237 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.68□□□□□ -0.38
BdnfP21237 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BdnfP21237 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BdnfP21237 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
BdnfP21237 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.68□□□□□ -0.38
BdnfP21237 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
BdnfP21237 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.68□□□□□ -0.38
BdnfP21237 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
BdnfP21237 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.68□□□□□ -0.38
BdnfP21237 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BdnfP21237 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BdnfP21237 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
BdnfP21237 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
BdnfP21237 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
BdnfP21237 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BdnfP21237 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
BdnfP21237 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.68□□□□□ -0.38
BdnfP21237 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BdnfP21237 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
BdnfP21237 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BdnfP21237 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BdnfP21237 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
BdnfP21237 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BdnfP21237 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.68□□□□□ -0.38
BdnfP21237 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
BdnfP21237 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.68□□□□□ -0.38
BdnfP21237 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.68□□□□□ -0.38
BdnfP21237 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BdnfP21237 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
BdnfP21237 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.67□□□□□ -0.38
BdnfP21237 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.67□□□□□ -0.38
BdnfP21237 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.67□□□□□ -0.38
BdnfP21237 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.67□□□□□ -0.38
BdnfP21237 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.67□□□□□ -0.38
BdnfP21237 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
BdnfP21237 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.67□□□□□ -0.38
BdnfP21237 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BdnfP21237 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
BdnfP21237 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BdnfP21237 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
BdnfP21237 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
BdnfP21237 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
BdnfP21237 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
BdnfP21237 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BdnfP21237 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BdnfP21237 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.67□□□□□ -0.38
BdnfP21237 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BdnfP21237 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.67□□□□□ -0.38
BdnfP21237 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
BdnfP21237 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.67□□□□□ -0.38
BdnfP21237 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BdnfP21237 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BdnfP21237 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
BdnfP21237 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
BdnfP21237 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.67□□□□□ -0.38
BdnfP21237 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BdnfP21237 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BdnfP21237 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
BdnfP21237 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BdnfP21237 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.67□□□□□ -0.38
BdnfP21237 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
BdnfP21237 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BdnfP21237 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms