Protein–RNA interactions for Protein: P20615

Hoxb9, Homeobox protein Hox-B9, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb9P20615 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxb9P20615 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxb9P20615 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxb9P20615 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Hoxb9P20615 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxb9P20615 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxb9P20615 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxb9P20615 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxb9P20615 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxb9P20615 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxb9P20615 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
Hoxb9P20615 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxb9P20615 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxb9P20615 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hoxb9P20615 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Hoxb9P20615 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb9P20615 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.63□□□□□ -0.39
Hoxb9P20615 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.63□□□□□ -0.39
Hoxb9P20615 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Hoxb9P20615 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb9P20615 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb9P20615 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb9P20615 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb9P20615 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Hoxb9P20615 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Hoxb9P20615 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb9P20615 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb9P20615 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb9P20615 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb9P20615 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb9P20615 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.63□□□□□ -0.39
Hoxb9P20615 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb9P20615 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb9P20615 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb9P20615 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb9P20615 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Hoxb9P20615 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb9P20615 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb9P20615 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb9P20615 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.63□□□□□ -0.39
Hoxb9P20615 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb9P20615 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Hoxb9P20615 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb9P20615 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb9P20615 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.63□□□□□ -0.39
Hoxb9P20615 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Hoxb9P20615 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.63□□□□□ -0.39
Hoxb9P20615 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb9P20615 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb9P20615 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hoxb9P20615 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxb9P20615 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxb9P20615 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Hoxb9P20615 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Hoxb9P20615 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.62□□□□□ -0.39
Hoxb9P20615 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxb9P20615 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxb9P20615 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Hoxb9P20615 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxb9P20615 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Hoxb9P20615 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Hoxb9P20615 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxb9P20615 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxb9P20615 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.62□□□□□ -0.39
Hoxb9P20615 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Hoxb9P20615 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Hoxb9P20615 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.62□□□□□ -0.39
Hoxb9P20615 Gm16202-201ENSMUST00000117532 544 ntBASIC12.62□□□□□ -0.39
Hoxb9P20615 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxb9P20615 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.62□□□□□ -0.39
Hoxb9P20615 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Hoxb9P20615 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.62□□□□□ -0.39
Hoxb9P20615 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxb9P20615 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.62□□□□□ -0.39
Hoxb9P20615 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.62□□□□□ -0.39
Hoxb9P20615 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxb9P20615 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Hoxb9P20615 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Hoxb9P20615 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxb9P20615 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Hoxb9P20615 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxb9P20615 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxb9P20615 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Hoxb9P20615 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxb9P20615 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxb9P20615 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxb9P20615 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxb9P20615 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxb9P20615 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxb9P20615 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Hoxb9P20615 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxb9P20615 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxb9P20615 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxb9P20615 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Hoxb9P20615 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxb9P20615 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxb9P20615 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxb9P20615 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxb9P20615 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxb9P20615 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms