Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Rb1P13405 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rb1P13405 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rb1P13405 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rb1P13405 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rb1P13405 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rb1P13405 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rb1P13405 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rb1P13405 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.57□□□□□ -0.24
Rb1P13405 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rb1P13405 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.57□□□□□ -0.24
Rb1P13405 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rb1P13405 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.57□□□□□ -0.24
Rb1P13405 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rb1P13405 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Rb1P13405 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rb1P13405 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rb1P13405 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rb1P13405 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rb1P13405 Gm38273-201ENSMUST00000194987 2382 ntBASIC13.57□□□□□ -0.24
Rb1P13405 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rb1P13405 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.57□□□□□ -0.24
Rb1P13405 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rb1P13405 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Rb1P13405 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rb1P13405 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rb1P13405 Mir1247-201ENSMUST00000116706 82 ntBASIC13.57□□□□□ -0.24
Rb1P13405 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rb1P13405 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.57□□□□□ -0.24
Rb1P13405 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.57□□□□□ -0.24
Rb1P13405 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.57□□□□□ -0.24
Rb1P13405 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.57□□□□□ -0.24
Rb1P13405 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.57□□□□□ -0.24
Rb1P13405 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rb1P13405 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rb1P13405 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.57□□□□□ -0.24
Rb1P13405 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rb1P13405 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rb1P13405 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.57□□□□□ -0.24
Rb1P13405 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.57□□□□□ -0.24
Rb1P13405 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rb1P13405 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rb1P13405 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rb1P13405 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rb1P13405 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Rb1P13405 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rb1P13405 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rb1P13405 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rb1P13405 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Rb1P13405 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rb1P13405 Gm13612-201ENSMUST00000119276 390 ntBASIC13.56□□□□□ -0.24
Rb1P13405 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.56□□□□□ -0.24
Rb1P13405 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rb1P13405 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.56□□□□□ -0.24
Rb1P13405 Gm24196-201ENSMUST00000179161 110 ntBASIC13.56□□□□□ -0.24
Rb1P13405 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.56□□□□□ -0.24
Rb1P13405 Gm38223-201ENSMUST00000194484 695 ntBASIC13.56□□□□□ -0.24
Rb1P13405 Gm38671-201ENSMUST00000200573 130 ntBASIC13.56□□□□□ -0.24
Rb1P13405 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.56□□□□□ -0.24
Rb1P13405 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Rb1P13405 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rb1P13405 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.56□□□□□ -0.24
Rb1P13405 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rb1P13405 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Rb1P13405 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rb1P13405 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rb1P13405 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rb1P13405 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Rb1P13405 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rb1P13405 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rb1P13405 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Rb1P13405 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rb1P13405 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rb1P13405 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rb1P13405 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Rb1P13405 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rb1P13405 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rb1P13405 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC13.55□□□□□ -0.24
Rb1P13405 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rb1P13405 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rb1P13405 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Rb1P13405 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rb1P13405 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rb1P13405 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Rb1P13405 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rb1P13405 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rb1P13405 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rb1P13405 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rb1P13405 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.55□□□□□ -0.24
Rb1P13405 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.55□□□□□ -0.24
Rb1P13405 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.55□□□□□ -0.24
Rb1P13405 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.55□□□□□ -0.24
Rb1P13405 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.55□□□□□ -0.24
Rb1P13405 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.55□□□□□ -0.24
Rb1P13405 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.55□□□□□ -0.24
Rb1P13405 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.55□□□□□ -0.24
Rb1P13405 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rb1P13405 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rb1P13405 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Rb1P13405 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms