Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn1P12960 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn1P12960 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn1P12960 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn1P12960 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn1P12960 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn1P12960 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn1P12960 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn1P12960 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cntn1P12960 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn1P12960 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn1P12960 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn1P12960 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn1P12960 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn1P12960 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn1P12960 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn1P12960 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn1P12960 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn1P12960 Gm16202-201ENSMUST00000117532 544 ntBASIC12.66□□□□□ -0.38
Cntn1P12960 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.66□□□□□ -0.38
Cntn1P12960 Gm8062-201ENSMUST00000139696 444 ntBASIC12.66□□□□□ -0.38
Cntn1P12960 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.66□□□□□ -0.38
Cntn1P12960 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn1P12960 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.66□□□□□ -0.38
Cntn1P12960 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cntn1P12960 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn1P12960 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.66□□□□□ -0.38
Cntn1P12960 Gm37497-201ENSMUST00000195830 798 ntBASIC12.66□□□□□ -0.38
Cntn1P12960 Gm44069-201ENSMUST00000204898 506 ntBASIC12.66□□□□□ -0.38
Cntn1P12960 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn1P12960 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn1P12960 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.66□□□□□ -0.38
Cntn1P12960 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn1P12960 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn1P12960 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn1P12960 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Cntn1P12960 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn1P12960 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn1P12960 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.66□□□□□ -0.38
Cntn1P12960 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn1P12960 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn1P12960 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn1P12960 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn1P12960 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn1P12960 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn1P12960 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn1P12960 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn1P12960 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cntn1P12960 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn1P12960 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn1P12960 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn1P12960 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cntn1P12960 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn1P12960 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn1P12960 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn1P12960 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn1P12960 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn1P12960 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn1P12960 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn1P12960 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn1P12960 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
Cntn1P12960 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.65□□□□□ -0.38
Cntn1P12960 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn1P12960 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn1P12960 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.65□□□□□ -0.38
Cntn1P12960 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cntn1P12960 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.65□□□□□ -0.38
Cntn1P12960 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn1P12960 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn1P12960 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn1P12960 Gm37424-201ENSMUST00000191727 561 ntBASIC12.65□□□□□ -0.38
Cntn1P12960 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.65□□□□□ -0.38
Cntn1P12960 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.65□□□□□ -0.38
Cntn1P12960 Gm45841-201ENSMUST00000207700 164 ntBASIC12.65□□□□□ -0.38
Cntn1P12960 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.65□□□□□ -0.38
Cntn1P12960 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.65□□□□□ -0.38
Cntn1P12960 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn1P12960 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn1P12960 Gm9899-201ENSMUST00000065519 555 ntBASIC12.65□□□□□ -0.38
Cntn1P12960 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Cntn1P12960 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn1P12960 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.65□□□□□ -0.38
Cntn1P12960 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cntn1P12960 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn1P12960 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn1P12960 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn1P12960 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn1P12960 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn1P12960 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn1P12960 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn1P12960 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn1P12960 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn1P12960 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn1P12960 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.65□□□□□ -0.38
Cntn1P12960 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cntn1P12960 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.65□□□□□ -0.39
Cntn1P12960 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cntn1P12960 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Cntn1P12960 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.64□□□□□ -0.39
Cntn1P12960 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms