Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fv4P11370 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fv4P11370 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fv4P11370 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fv4P11370 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fv4P11370 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fv4P11370 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fv4P11370 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Fv4P11370 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fv4P11370 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Fv4P11370 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Fv4P11370 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.76□□□□□ -0.37
Fv4P11370 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fv4P11370 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Fv4P11370 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fv4P11370 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fv4P11370 Gm6447-201ENSMUST00000118905 835 ntBASIC12.76□□□□□ -0.37
Fv4P11370 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fv4P11370 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.76□□□□□ -0.37
Fv4P11370 Gm38223-201ENSMUST00000194484 695 ntBASIC12.76□□□□□ -0.37
Fv4P11370 Gm7730-201ENSMUST00000212486 454 ntBASIC12.76□□□□□ -0.37
Fv4P11370 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.76□□□□□ -0.37
Fv4P11370 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fv4P11370 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.76□□□□□ -0.37
Fv4P11370 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fv4P11370 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fv4P11370 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fv4P11370 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fv4P11370 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fv4P11370 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fv4P11370 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fv4P11370 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fv4P11370 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fv4P11370 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Fv4P11370 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fv4P11370 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fv4P11370 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fv4P11370 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Fv4P11370 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fv4P11370 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Fv4P11370 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Fv4P11370 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fv4P11370 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Fv4P11370 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.75□□□□□ -0.37
Fv4P11370 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fv4P11370 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fv4P11370 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fv4P11370 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.75□□□□□ -0.37
Fv4P11370 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Fv4P11370 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.75□□□□□ -0.37
Fv4P11370 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fv4P11370 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fv4P11370 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fv4P11370 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Fv4P11370 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Fv4P11370 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
Fv4P11370 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Fv4P11370 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Fv4P11370 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Fv4P11370 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.75□□□□□ -0.37
Fv4P11370 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.75□□□□□ -0.37
Fv4P11370 Gm42612-201ENSMUST00000197986 623 ntBASIC12.75□□□□□ -0.37
Fv4P11370 Gm43170-201ENSMUST00000199827 612 ntBASIC12.75□□□□□ -0.37
Fv4P11370 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fv4P11370 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.75□□□□□ -0.37
Fv4P11370 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Fv4P11370 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.75□□□□□ -0.37
Fv4P11370 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Fv4P11370 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.75□□□□□ -0.37
Fv4P11370 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.75□□□□□ -0.37
Fv4P11370 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.75□□□□□ -0.37
Fv4P11370 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.75□□□□□ -0.37
Fv4P11370 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fv4P11370 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fv4P11370 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fv4P11370 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fv4P11370 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fv4P11370 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fv4P11370 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fv4P11370 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Fv4P11370 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Fv4P11370 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Fv4P11370 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fv4P11370 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Fv4P11370 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Fv4P11370 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fv4P11370 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fv4P11370 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Fv4P11370 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.74□□□□□ -0.37
Fv4P11370 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fv4P11370 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fv4P11370 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.74□□□□□ -0.37
Fv4P11370 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.74□□□□□ -0.37
Fv4P11370 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fv4P11370 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Fv4P11370 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fv4P11370 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Fv4P11370 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fv4P11370 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Fv4P11370 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms