Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl3P10855 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl3P10855 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Ccl3P10855 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl3P10855 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Ccl3P10855 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl3P10855 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl3P10855 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Ccl3P10855 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.6□□□□□ -0.55
Ccl3P10855 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl3P10855 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl3P10855 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl3P10855 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Ccl3P10855 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.6□□□□□ -0.55
Ccl3P10855 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl3P10855 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl3P10855 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl3P10855 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Ccl3P10855 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl3P10855 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Ccl3P10855 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Ccl3P10855 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Ccl3P10855 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.6□□□□□ -0.55
Ccl3P10855 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl3P10855 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl3P10855 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl3P10855 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl3P10855 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl3P10855 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl3P10855 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Ccl3P10855 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl3P10855 Gm25214-201ENSMUST00000104573 129 ntBASIC11.6□□□□□ -0.55
Ccl3P10855 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.6□□□□□ -0.55
Ccl3P10855 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC11.6□□□□□ -0.55
Ccl3P10855 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.6□□□□□ -0.55
Ccl3P10855 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.6□□□□□ -0.55
Ccl3P10855 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl3P10855 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.6□□□□□ -0.55
Ccl3P10855 Gm2260-201ENSMUST00000184965 657 ntBASIC11.6□□□□□ -0.55
Ccl3P10855 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.6□□□□□ -0.55
Ccl3P10855 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.6□□□□□ -0.55
Ccl3P10855 Gm44967-201ENSMUST00000207047 631 ntBASIC11.6□□□□□ -0.55
Ccl3P10855 Gm5950-201ENSMUST00000213337 772 ntBASIC11.6□□□□□ -0.55
Ccl3P10855 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.6□□□□□ -0.55
Ccl3P10855 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl3P10855 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl3P10855 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl3P10855 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl3P10855 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl3P10855 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Ccl3P10855 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl3P10855 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl3P10855 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl3P10855 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl3P10855 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.6□□□□□ -0.55
Ccl3P10855 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl3P10855 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl3P10855 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl3P10855 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl3P10855 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl3P10855 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl3P10855 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl3P10855 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl3P10855 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.59□□□□□ -0.55
Ccl3P10855 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.59□□□□□ -0.55
Ccl3P10855 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl3P10855 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl3P10855 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Ccl3P10855 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Ccl3P10855 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl3P10855 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl3P10855 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl3P10855 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl3P10855 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.59□□□□□ -0.55
Ccl3P10855 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl3P10855 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC11.59□□□□□ -0.55
Ccl3P10855 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl3P10855 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.59□□□□□ -0.55
Ccl3P10855 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl3P10855 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Ccl3P10855 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl3P10855 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl3P10855 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl3P10855 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl3P10855 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl3P10855 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl3P10855 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.59□□□□□ -0.55
Ccl3P10855 Gm15276-201ENSMUST00000145953 498 ntBASIC11.59□□□□□ -0.55
Ccl3P10855 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl3P10855 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.59□□□□□ -0.55
Ccl3P10855 Gm38317-201ENSMUST00000195564 343 ntBASIC11.59□□□□□ -0.55
Ccl3P10855 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.59□□□□□ -0.55
Ccl3P10855 Gm8099-201ENSMUST00000200510 742 ntBASIC11.59□□□□□ -0.55
Ccl3P10855 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.59□□□□□ -0.55
Ccl3P10855 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.59□□□□□ -0.55
Ccl3P10855 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.59□□□□□ -0.55
Ccl3P10855 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.59□□□□□ -0.55
Ccl3P10855 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl3P10855 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl3P10855 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms