Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Smim1P0C8K7 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC9.03□□□□□ -0.96
Smim1P0C8K7 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smim1P0C8K7 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Smim1P0C8K7 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smim1P0C8K7 Gm13418-201ENSMUST00000119097 944 ntBASIC9.03□□□□□ -0.96
Smim1P0C8K7 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC9.03□□□□□ -0.96
Smim1P0C8K7 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC9.03□□□□□ -0.96
Smim1P0C8K7 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smim1P0C8K7 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC9.03□□□□□ -0.96
Smim1P0C8K7 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smim1P0C8K7 Gm13830-205ENSMUST00000201195 1155 ntBASIC9.03□□□□□ -0.96
Smim1P0C8K7 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Smim1P0C8K7 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Smim1P0C8K7 Gm4971-201ENSMUST00000205991 1108 ntBASIC9.03□□□□□ -0.96
Smim1P0C8K7 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Smim1P0C8K7 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC9.03□□□□□ -0.96
Smim1P0C8K7 AC131997.1-201ENSMUST00000228611 1229 ntBASIC9.03□□□□□ -0.96
Smim1P0C8K7 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Smim1P0C8K7 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Smim1P0C8K7 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Smim1P0C8K7 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smim1P0C8K7 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smim1P0C8K7 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Smim1P0C8K7 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smim1P0C8K7 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC9.03□□□□□ -0.96
Smim1P0C8K7 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Smim1P0C8K7 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smim1P0C8K7 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Smim1P0C8K7 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smim1P0C8K7 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smim1P0C8K7 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smim1P0C8K7 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Smim1P0C8K7 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Smim1P0C8K7 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
Smim1P0C8K7 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.96
Smim1P0C8K7 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Smim1P0C8K7 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Smim1P0C8K7 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.96
Smim1P0C8K7 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Smim1P0C8K7 Gm6756-201ENSMUST00000180647 1620 ntBASIC9.02□□□□□ -0.96
Smim1P0C8K7 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Smim1P0C8K7 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Smim1P0C8K7 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smim1P0C8K7 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Smim1P0C8K7 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Smim1P0C8K7 Gm10110-202ENSMUST00000228705 3220 ntBASIC9.02□□□□□ -0.97
Smim1P0C8K7 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Smim1P0C8K7 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smim1P0C8K7 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smim1P0C8K7 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smim1P0C8K7 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC9.02□□□□□ -0.97
Smim1P0C8K7 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC9.02□□□□□ -0.97
Smim1P0C8K7 Gm16198-201ENSMUST00000118766 670 ntBASIC9.02□□□□□ -0.97
Smim1P0C8K7 Gm15483-201ENSMUST00000120338 456 ntBASIC9.02□□□□□ -0.97
Smim1P0C8K7 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC9.02□□□□□ -0.97
Smim1P0C8K7 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Smim1P0C8K7 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC9.02□□□□□ -0.97
Smim1P0C8K7 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Smim1P0C8K7 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smim1P0C8K7 Gm37714-201ENSMUST00000194742 342 ntBASIC9.02□□□□□ -0.97
Smim1P0C8K7 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Smim1P0C8K7 Gm19931-201ENSMUST00000198920 368 ntBASIC9.02□□□□□ -0.97
Smim1P0C8K7 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC9.02□□□□□ -0.97
Smim1P0C8K7 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC9.02□□□□□ -0.97
Smim1P0C8K7 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC9.02□□□□□ -0.97
Smim1P0C8K7 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC9.02□□□□□ -0.97
Smim1P0C8K7 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smim1P0C8K7 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smim1P0C8K7 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smim1P0C8K7 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Smim1P0C8K7 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smim1P0C8K7 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Smim1P0C8K7 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Smim1P0C8K7 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC9.02□□□□□ -0.97
Smim1P0C8K7 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smim1P0C8K7 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smim1P0C8K7 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Smim1P0C8K7 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Smim1P0C8K7 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.97
Smim1P0C8K7 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Smim1P0C8K7 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Smim1P0C8K7 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smim1P0C8K7 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Smim1P0C8K7 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Smim1P0C8K7 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Smim1P0C8K7 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Smim1P0C8K7 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smim1P0C8K7 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC9.01□□□□□ -0.97
Smim1P0C8K7 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smim1P0C8K7 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Smim1P0C8K7 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC9.01□□□□□ -0.97
Smim1P0C8K7 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Smim1P0C8K7 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smim1P0C8K7 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Smim1P0C8K7 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smim1P0C8K7 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Smim1P0C8K7 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smim1P0C8K7 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Smim1P0C8K7 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms