Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NclP09405 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NclP09405 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NclP09405 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NclP09405 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NclP09405 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC19.56■□□□□ 0.72
NclP09405 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NclP09405 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
NclP09405 Gm12329-201ENSMUST00000120829 1007 ntBASIC19.56■□□□□ 0.72
NclP09405 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC19.56■□□□□ 0.72
NclP09405 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC19.56■□□□□ 0.72
NclP09405 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC19.56■□□□□ 0.72
NclP09405 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC19.56■□□□□ 0.72
NclP09405 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC19.56■□□□□ 0.72
NclP09405 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NclP09405 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
NclP09405 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
NclP09405 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NclP09405 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NclP09405 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NclP09405 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
NclP09405 Gm18244-201ENSMUST00000219747 1566 ntBASIC19.56■□□□□ 0.72
NclP09405 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
NclP09405 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NclP09405 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
NclP09405 Gm10729-202ENSMUST00000193403 1375 ntBASIC19.56■□□□□ 0.72
NclP09405 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NclP09405 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
NclP09405 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NclP09405 Gm43579-201ENSMUST00000202387 1307 ntBASIC19.55■□□□□ 0.72
NclP09405 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
NclP09405 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NclP09405 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
NclP09405 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NclP09405 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NclP09405 Gm26185-201ENSMUST00000157692 266 ntBASIC19.55■□□□□ 0.72
NclP09405 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NclP09405 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NclP09405 Gm28693-202ENSMUST00000190758 331 ntBASIC19.55■□□□□ 0.72
NclP09405 Gm43118-201ENSMUST00000199149 775 ntBASIC19.55■□□□□ 0.72
NclP09405 AC135669.1-202ENSMUST00000216742 540 ntBASIC19.55■□□□□ 0.72
NclP09405 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
NclP09405 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NclP09405 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NclP09405 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
NclP09405 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NclP09405 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC19.55■□□□□ 0.72
NclP09405 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
NclP09405 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NclP09405 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NclP09405 Gm43423-201ENSMUST00000198390 2094 ntBASIC19.55■□□□□ 0.72
NclP09405 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NclP09405 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NclP09405 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC19.54■□□□□ 0.72
NclP09405 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NclP09405 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
NclP09405 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
NclP09405 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
NclP09405 Gm43133-201ENSMUST00000197472 463 ntBASIC19.54■□□□□ 0.72
NclP09405 AC154171.1-201ENSMUST00000224610 643 ntBASIC19.54■□□□□ 0.72
NclP09405 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NclP09405 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NclP09405 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NclP09405 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
NclP09405 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
NclP09405 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NclP09405 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NclP09405 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
NclP09405 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NclP09405 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NclP09405 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NclP09405 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NclP09405 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NclP09405 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NclP09405 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC19.53■□□□□ 0.72
NclP09405 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NclP09405 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NclP09405 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
NclP09405 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NclP09405 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NclP09405 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NclP09405 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NclP09405 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NclP09405 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NclP09405 Gm6161-201ENSMUST00000121942 1102 ntBASIC19.53■□□□□ 0.72
NclP09405 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NclP09405 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC19.53■□□□□ 0.72
NclP09405 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
NclP09405 Gm6254-201ENSMUST00000168178 1072 ntBASIC19.53■□□□□ 0.72
NclP09405 Gm6153-201ENSMUST00000172004 1058 ntBASIC19.53■□□□□ 0.72
NclP09405 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
NclP09405 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NclP09405 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NclP09405 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC19.53■□□□□ 0.72
NclP09405 Gm5641-202ENSMUST00000198699 1080 ntBASIC19.53■□□□□ 0.72
NclP09405 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NclP09405 Gm19163-201ENSMUST00000223313 780 ntBASIC19.53■□□□□ 0.72
NclP09405 AC154462.2-201ENSMUST00000227519 370 ntBASIC19.53■□□□□ 0.72
NclP09405 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NclP09405 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms