Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ApoeP08226 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ApoeP08226 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ApoeP08226 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ApoeP08226 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
ApoeP08226 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
ApoeP08226 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.5□□□□□ -0.41
ApoeP08226 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ApoeP08226 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
ApoeP08226 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.49□□□□□ -0.41
ApoeP08226 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
ApoeP08226 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ApoeP08226 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ApoeP08226 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ApoeP08226 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ApoeP08226 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ApoeP08226 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ApoeP08226 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ApoeP08226 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
ApoeP08226 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
ApoeP08226 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.49□□□□□ -0.41
ApoeP08226 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ApoeP08226 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.49□□□□□ -0.41
ApoeP08226 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ApoeP08226 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ApoeP08226 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.49□□□□□ -0.41
ApoeP08226 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ApoeP08226 Gm15240-201ENSMUST00000118156 720 ntBASIC12.49□□□□□ -0.41
ApoeP08226 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.49□□□□□ -0.41
ApoeP08226 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.49□□□□□ -0.41
ApoeP08226 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ApoeP08226 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ApoeP08226 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.49□□□□□ -0.41
ApoeP08226 Gm24158-201ENSMUST00000175263 71 ntBASIC12.49□□□□□ -0.41
ApoeP08226 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.49□□□□□ -0.41
ApoeP08226 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.49□□□□□ -0.41
ApoeP08226 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.49□□□□□ -0.41
ApoeP08226 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.49□□□□□ -0.41
ApoeP08226 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ApoeP08226 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ApoeP08226 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
ApoeP08226 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
ApoeP08226 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ApoeP08226 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ApoeP08226 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ApoeP08226 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ApoeP08226 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ApoeP08226 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ApoeP08226 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
ApoeP08226 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.49□□□□□ -0.41
ApoeP08226 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.48□□□□□ -0.41
ApoeP08226 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ApoeP08226 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ApoeP08226 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ApoeP08226 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.48□□□□□ -0.41
ApoeP08226 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
ApoeP08226 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ApoeP08226 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ApoeP08226 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ApoeP08226 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ApoeP08226 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
ApoeP08226 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ApoeP08226 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
ApoeP08226 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.48□□□□□ -0.41
ApoeP08226 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.48□□□□□ -0.41
ApoeP08226 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ApoeP08226 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ApoeP08226 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
ApoeP08226 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ApoeP08226 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ApoeP08226 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.48□□□□□ -0.41
ApoeP08226 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.48□□□□□ -0.41
ApoeP08226 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ApoeP08226 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.48□□□□□ -0.41
ApoeP08226 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ApoeP08226 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.48□□□□□ -0.41
ApoeP08226 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.48□□□□□ -0.41
ApoeP08226 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.48□□□□□ -0.41
ApoeP08226 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.48□□□□□ -0.41
ApoeP08226 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.48□□□□□ -0.41
ApoeP08226 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.48□□□□□ -0.41
ApoeP08226 Gm25948-201ENSMUST00000175334 112 ntBASIC12.48□□□□□ -0.41
ApoeP08226 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.48□□□□□ -0.41
ApoeP08226 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.48□□□□□ -0.41
ApoeP08226 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.48□□□□□ -0.41
ApoeP08226 Gm46209-201ENSMUST00000217912 553 ntBASIC12.48□□□□□ -0.41
ApoeP08226 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
ApoeP08226 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ApoeP08226 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
ApoeP08226 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.48□□□□□ -0.41
ApoeP08226 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
ApoeP08226 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ApoeP08226 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
ApoeP08226 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
ApoeP08226 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ApoeP08226 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ApoeP08226 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
ApoeP08226 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
ApoeP08226 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.48□□□□□ -0.41
ApoeP08226 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms