Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.99□□□□□ -0.17
TnfP06804 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TnfP06804 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TnfP06804 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TnfP06804 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TnfP06804 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.99□□□□□ -0.17
TnfP06804 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TnfP06804 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TnfP06804 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TnfP06804 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TnfP06804 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TnfP06804 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TnfP06804 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TnfP06804 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
TnfP06804 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TnfP06804 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TnfP06804 Gm15198-201ENSMUST00000117283 177 ntBASIC13.98□□□□□ -0.17
TnfP06804 Gm11591-201ENSMUST00000120063 702 ntBASIC13.98□□□□□ -0.17
TnfP06804 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.98□□□□□ -0.17
TnfP06804 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.98□□□□□ -0.17
TnfP06804 Gm17208-201ENSMUST00000168388 535 ntBASIC13.98□□□□□ -0.17
TnfP06804 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
TnfP06804 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.98□□□□□ -0.17
TnfP06804 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TnfP06804 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.98□□□□□ -0.17
TnfP06804 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TnfP06804 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TnfP06804 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.98□□□□□ -0.17
TnfP06804 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
TnfP06804 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TnfP06804 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TnfP06804 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TnfP06804 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.98□□□□□ -0.17
TnfP06804 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.98□□□□□ -0.17
TnfP06804 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.98□□□□□ -0.17
TnfP06804 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TnfP06804 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TnfP06804 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TnfP06804 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
TnfP06804 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TnfP06804 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TnfP06804 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.97□□□□□ -0.17
TnfP06804 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TnfP06804 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TnfP06804 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TnfP06804 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
TnfP06804 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
TnfP06804 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TnfP06804 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TnfP06804 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.97□□□□□ -0.17
TnfP06804 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TnfP06804 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TnfP06804 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TnfP06804 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TnfP06804 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TnfP06804 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TnfP06804 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TnfP06804 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TnfP06804 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TnfP06804 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TnfP06804 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TnfP06804 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.97□□□□□ -0.17
TnfP06804 Gm37042-201ENSMUST00000193816 581 ntBASIC13.97□□□□□ -0.17
TnfP06804 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TnfP06804 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.97□□□□□ -0.17
TnfP06804 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.97□□□□□ -0.17
TnfP06804 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
TnfP06804 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.97□□□□□ -0.17
TnfP06804 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TnfP06804 Olfr582-201ENSMUST00000098212 960 ntBASIC13.97□□□□□ -0.17
TnfP06804 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TnfP06804 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TnfP06804 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TnfP06804 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TnfP06804 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
TnfP06804 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TnfP06804 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TnfP06804 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TnfP06804 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
TnfP06804 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TnfP06804 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TnfP06804 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TnfP06804 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TnfP06804 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
TnfP06804 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.96□□□□□ -0.17
TnfP06804 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TnfP06804 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TnfP06804 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TnfP06804 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TnfP06804 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.96□□□□□ -0.17
TnfP06804 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
TnfP06804 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TnfP06804 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TnfP06804 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TnfP06804 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TnfP06804 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TnfP06804 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.96□□□□□ -0.17
TnfP06804 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.96□□□□□ -0.17
TnfP06804 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TnfP06804 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms