Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm22331-201ENSMUST00000158066 136 ntBASIC11.78□□□□□ -0.52
P06344 Gm29127-201ENSMUST00000188304 517 ntBASIC11.78□□□□□ -0.52
P06344 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P06344 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.78□□□□□ -0.52
P06344 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.78□□□□□ -0.52
P06344 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.78□□□□□ -0.52
P06344 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06344 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P06344 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06344 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06344 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P06344 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06344 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06344 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.78□□□□□ -0.52
P06344 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06344 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
P06344 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P06344 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06344 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P06344 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.78□□□□□ -0.52
P06344 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.78□□□□□ -0.52
P06344 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06344 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06344 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06344 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
P06344 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
P06344 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
P06344 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.77□□□□□ -0.52
P06344 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.77□□□□□ -0.52
P06344 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
P06344 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
P06344 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.77□□□□□ -0.52
P06344 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
P06344 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
P06344 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
P06344 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
P06344 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
P06344 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
P06344 Gm14350-201ENSMUST00000116642 640 ntBASIC11.77□□□□□ -0.53
P06344 Gm13226-201ENSMUST00000117838 404 ntBASIC11.77□□□□□ -0.53
P06344 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.77□□□□□ -0.53
P06344 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.77□□□□□ -0.53
P06344 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
P06344 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.77□□□□□ -0.53
P06344 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.77□□□□□ -0.53
P06344 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.77□□□□□ -0.53
P06344 AC153962.4-201ENSMUST00000217878 242 ntBASIC11.77□□□□□ -0.53
P06344 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.77□□□□□ -0.53
P06344 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.77□□□□□ -0.53
P06344 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
P06344 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
P06344 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
P06344 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
P06344 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
P06344 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
P06344 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
P06344 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
P06344 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
P06344 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
P06344 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
P06344 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
P06344 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
P06344 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
P06344 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
P06344 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
P06344 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
P06344 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
P06344 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P06344 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P06344 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
P06344 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P06344 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
P06344 Gm12203-201ENSMUST00000118235 598 ntBASIC11.76□□□□□ -0.53
P06344 Gm12209-201ENSMUST00000120089 596 ntBASIC11.76□□□□□ -0.53
P06344 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
P06344 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P06344 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.76□□□□□ -0.53
P06344 Mir1982-201ENSMUST00000157368 74 ntBASIC11.76□□□□□ -0.53
P06344 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.76□□□□□ -0.53
P06344 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.76□□□□□ -0.53
P06344 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.76□□□□□ -0.53
P06344 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.76□□□□□ -0.53
P06344 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.76□□□□□ -0.53
P06344 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.76□□□□□ -0.53
P06344 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
P06344 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.76□□□□□ -0.53
P06344 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.76□□□□□ -0.53
P06344 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.76□□□□□ -0.53
P06344 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.76□□□□□ -0.53
P06344 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.76□□□□□ -0.53
P06344 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P06344 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
P06344 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
P06344 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
P06344 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
P06344 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.76□□□□□ -0.53
P06344 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
P06344 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
P06344 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
P06344 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms