Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P04940 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
P04940 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
P04940 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P04940 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P04940 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
P04940 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P04940 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P04940 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC10.7□□□□□ -0.7
P04940 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
P04940 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC10.7□□□□□ -0.7
P04940 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
P04940 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC10.7□□□□□ -0.7
P04940 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC10.7□□□□□ -0.7
P04940 Gm7287-201ENSMUST00000205267 602 ntBASIC10.7□□□□□ -0.7
P04940 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
P04940 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC10.7□□□□□ -0.7
P04940 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P04940 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P04940 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC10.7□□□□□ -0.7
P04940 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P04940 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
P04940 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
P04940 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
P04940 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P04940 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
P04940 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC10.7□□□□□ -0.7
P04940 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
P04940 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P04940 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
P04940 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
P04940 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P04940 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P04940 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P04940 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
P04940 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
P04940 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P04940 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
P04940 Gm15222-202ENSMUST00000228667 1726 ntBASIC10.7□□□□□ -0.7
P04940 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04940 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04940 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04940 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04940 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04940 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04940 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04940 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04940 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC10.69□□□□□ -0.7
P04940 AC101945.2-201ENSMUST00000227886 1377 ntBASIC10.69□□□□□ -0.7
P04940 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04940 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04940 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04940 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC10.69□□□□□ -0.7
P04940 Gm14928-201ENSMUST00000120198 477 ntBASIC10.69□□□□□ -0.7
P04940 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC10.69□□□□□ -0.7
P04940 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
P04940 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
P04940 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC10.69□□□□□ -0.7
P04940 Ighv5-13-201ENSMUST00000193550 290 ntBASIC10.69□□□□□ -0.7
P04940 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC10.69□□□□□ -0.7
P04940 Gm38297-201ENSMUST00000195122 1057 ntBASIC10.69□□□□□ -0.7
P04940 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
P04940 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC10.69□□□□□ -0.7
P04940 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC10.69□□□□□ -0.7
P04940 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
P04940 Gm45384-201ENSMUST00000210451 277 ntBASIC10.69□□□□□ -0.7
P04940 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC10.69□□□□□ -0.7
P04940 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10.69□□□□□ -0.7
P04940 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04940 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04940 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04940 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC10.69□□□□□ -0.7
P04940 AL645783.1-201ENSMUST00000221416 1832 ntBASIC10.69□□□□□ -0.7
P04940 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
P04940 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04940 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04940 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04940 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04940 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04940 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
P04940 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
P04940 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04940 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04940 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04940 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
P04940 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04940 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04940 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04940 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
P04940 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04940 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
P04940 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04940 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P04940 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P04940 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04940 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
P04940 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04940 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04940 Gm45003-201ENSMUST00000205875 2158 ntBASIC10.68□□□□□ -0.7
P04940 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms