Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC9.25□□□□□ -0.93
Hbb-b1P02088 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Gm42463-201ENSMUST00000198041 4886 ntBASIC9.25□□□□□ -0.93
Hbb-b1P02088 Gm15372-201ENSMUST00000120729 834 ntBASIC9.25□□□□□ -0.93
Hbb-b1P02088 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC9.25□□□□□ -0.93
Hbb-b1P02088 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC9.25□□□□□ -0.93
Hbb-b1P02088 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 AC122305.4-201ENSMUST00000216159 1206 ntBASIC9.25□□□□□ -0.93
Hbb-b1P02088 AC154757.1-201ENSMUST00000228289 336 ntBASIC9.25□□□□□ -0.93
Hbb-b1P02088 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 AC211878.3-201ENSMUST00000222629 2018 ntBASIC9.25□□□□□ -0.93
Hbb-b1P02088 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC9.25□□□□□ -0.93
Hbb-b1P02088 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC9.25□□□□□ -0.93
Hbb-b1P02088 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Gm3928-201ENSMUST00000121141 1307 ntBASIC9.25□□□□□ -0.93
Hbb-b1P02088 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Gm18983-201ENSMUST00000222884 2729 ntBASIC9.25□□□□□ -0.93
Hbb-b1P02088 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Hbb-b1P02088 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Hbb-b1P02088 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Hbb-b1P02088 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hbb-b1P02088 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hbb-b1P02088 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hbb-b1P02088 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC9.24□□□□□ -0.93
Hbb-b1P02088 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Hbb-b1P02088 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hbb-b1P02088 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hbb-b1P02088 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hbb-b1P02088 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hbb-b1P02088 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hbb-b1P02088 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC9.24□□□□□ -0.93
Hbb-b1P02088 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hbb-b1P02088 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hbb-b1P02088 Gm6157-201ENSMUST00000199935 1897 ntBASIC9.24□□□□□ -0.93
Hbb-b1P02088 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hbb-b1P02088 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Hbb-b1P02088 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC9.24□□□□□ -0.93
Hbb-b1P02088 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC9.24□□□□□ -0.93
Hbb-b1P02088 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hbb-b1P02088 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hbb-b1P02088 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
Hbb-b1P02088 Gm5682-201ENSMUST00000173402 505 ntBASIC9.24□□□□□ -0.93
Hbb-b1P02088 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Hbb-b1P02088 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC9.24□□□□□ -0.93
Hbb-b1P02088 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Hbb-b1P02088 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Hbb-b1P02088 Gm45841-201ENSMUST00000207700 164 ntBASIC9.24□□□□□ -0.93
Hbb-b1P02088 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC9.24□□□□□ -0.93
Hbb-b1P02088 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC9.24□□□□□ -0.93
Hbb-b1P02088 AC121577.1-201ENSMUST00000227302 707 ntBASIC9.24□□□□□ -0.93
Hbb-b1P02088 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hbb-b1P02088 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hbb-b1P02088 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hbb-b1P02088 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hbb-b1P02088 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms