Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ifna1P01572 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ifna1P01572 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.13□□□□□ -0.63
Ifna1P01572 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ifna1P01572 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Ifna1P01572 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ifna1P01572 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Ifna1P01572 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Ifna1P01572 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ifna1P01572 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.13□□□□□ -0.63
Ifna1P01572 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ifna1P01572 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ifna1P01572 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ifna1P01572 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ifna1P01572 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ifna1P01572 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ifna1P01572 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Ifna1P01572 Gm6415-201ENSMUST00000118488 348 ntBASIC11.13□□□□□ -0.63
Ifna1P01572 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ifna1P01572 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ifna1P01572 Gm28630-201ENSMUST00000187806 498 ntBASIC11.13□□□□□ -0.63
Ifna1P01572 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.13□□□□□ -0.63
Ifna1P01572 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Ifna1P01572 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ifna1P01572 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ifna1P01572 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ifna1P01572 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ifna1P01572 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ifna1P01572 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Ifna1P01572 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ifna1P01572 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.13□□□□□ -0.63
Ifna1P01572 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Ifna1P01572 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ifna1P01572 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Ifna1P01572 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ifna1P01572 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.13□□□□□ -0.63
Ifna1P01572 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ifna1P01572 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ifna1P01572 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ifna1P01572 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ifna1P01572 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ifna1P01572 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ifna1P01572 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ifna1P01572 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ifna1P01572 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ifna1P01572 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ifna1P01572 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ifna1P01572 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ifna1P01572 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.12□□□□□ -0.63
Ifna1P01572 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.12□□□□□ -0.63
Ifna1P01572 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.12□□□□□ -0.63
Ifna1P01572 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ifna1P01572 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ifna1P01572 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ifna1P01572 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ifna1P01572 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.12□□□□□ -0.63
Ifna1P01572 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ifna1P01572 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ifna1P01572 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ifna1P01572 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ifna1P01572 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Ifna1P01572 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ifna1P01572 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.12□□□□□ -0.63
Ifna1P01572 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Ifna1P01572 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.12□□□□□ -0.63
Ifna1P01572 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ifna1P01572 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC11.12□□□□□ -0.63
Ifna1P01572 Gm8000-201ENSMUST00000188378 592 ntBASIC11.12□□□□□ -0.63
Ifna1P01572 Gm10253-201ENSMUST00000194270 940 ntBASIC11.12□□□□□ -0.63
Ifna1P01572 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ifna1P01572 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ifna1P01572 Gm5779-201ENSMUST00000218467 910 ntBASIC11.12□□□□□ -0.63
Ifna1P01572 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ifna1P01572 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ifna1P01572 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Ifna1P01572 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Ifna1P01572 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Ifna1P01572 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ifna1P01572 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ifna1P01572 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ifna1P01572 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ifna1P01572 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ifna1P01572 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ifna1P01572 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ifna1P01572 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Ifna1P01572 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Ifna1P01572 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Ifna1P01572 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ifna1P01572 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ifna1P01572 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Ifna1P01572 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ifna1P01572 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.12□□□□□ -0.63
Ifna1P01572 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.12□□□□□ -0.63
Ifna1P01572 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ifna1P01572 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ifna1P01572 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Ifna1P01572 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ifna1P01572 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.11□□□□□ -0.63
Ifna1P01572 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ifna1P01572 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms