Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClppO88696 Gm13612-201ENSMUST00000119276 390 ntBASIC12.95□□□□□ -0.34
ClppO88696 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.95□□□□□ -0.34
ClppO88696 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ClppO88696 Snora78-201ENSMUST00000158630 128 ntBASIC12.95□□□□□ -0.34
ClppO88696 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.95□□□□□ -0.34
ClppO88696 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
ClppO88696 Gm45784-201ENSMUST00000188360 142 ntBASIC12.95□□□□□ -0.34
ClppO88696 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
ClppO88696 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
ClppO88696 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
ClppO88696 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
ClppO88696 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClppO88696 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClppO88696 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClppO88696 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClppO88696 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClppO88696 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClppO88696 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ClppO88696 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ClppO88696 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClppO88696 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ClppO88696 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
ClppO88696 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClppO88696 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ClppO88696 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClppO88696 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClppO88696 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ClppO88696 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
ClppO88696 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClppO88696 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClppO88696 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ClppO88696 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
ClppO88696 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClppO88696 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClppO88696 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClppO88696 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClppO88696 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClppO88696 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.94□□□□□ -0.34
ClppO88696 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
ClppO88696 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClppO88696 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClppO88696 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClppO88696 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClppO88696 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.94□□□□□ -0.34
ClppO88696 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.94□□□□□ -0.34
ClppO88696 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClppO88696 Gm12742-201ENSMUST00000117326 410 ntBASIC12.94□□□□□ -0.34
ClppO88696 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClppO88696 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.94□□□□□ -0.34
ClppO88696 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.94□□□□□ -0.34
ClppO88696 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClppO88696 Gm24196-201ENSMUST00000179161 110 ntBASIC12.94□□□□□ -0.34
ClppO88696 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.94□□□□□ -0.34
ClppO88696 Gm29649-201ENSMUST00000185649 419 ntBASIC12.94□□□□□ -0.34
ClppO88696 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.94□□□□□ -0.34
ClppO88696 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.94□□□□□ -0.34
ClppO88696 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
ClppO88696 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.94□□□□□ -0.34
ClppO88696 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.94□□□□□ -0.34
ClppO88696 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClppO88696 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClppO88696 Gm10012-201ENSMUST00000078252 192 ntBASIC12.94□□□□□ -0.34
ClppO88696 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ClppO88696 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClppO88696 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClppO88696 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClppO88696 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClppO88696 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
ClppO88696 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
ClppO88696 Gm10686-201ENSMUST00000215389 3247 ntBASIC12.94□□□□□ -0.34
ClppO88696 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClppO88696 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ClppO88696 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
ClppO88696 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ClppO88696 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClppO88696 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClppO88696 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
ClppO88696 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClppO88696 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClppO88696 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClppO88696 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClppO88696 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ClppO88696 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClppO88696 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClppO88696 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
ClppO88696 Gm13226-201ENSMUST00000117838 404 ntBASIC12.93□□□□□ -0.34
ClppO88696 Gm13689-201ENSMUST00000119360 685 ntBASIC12.93□□□□□ -0.34
ClppO88696 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
ClppO88696 Gm38671-201ENSMUST00000200573 130 ntBASIC12.93□□□□□ -0.34
ClppO88696 Gm43630-201ENSMUST00000201550 776 ntBASIC12.93□□□□□ -0.34
ClppO88696 Gm42550-201ENSMUST00000201553 960 ntBASIC12.93□□□□□ -0.34
ClppO88696 Gm7561-201ENSMUST00000211203 886 ntBASIC12.93□□□□□ -0.34
ClppO88696 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.93□□□□□ -0.34
ClppO88696 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClppO88696 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClppO88696 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClppO88696 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClppO88696 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ClppO88696 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms