Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cops4O88544 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Cops4O88544 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cops4O88544 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cops4O88544 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cops4O88544 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cops4O88544 Gm24543-201ENSMUST00000103867 82 ntBASIC12.19□□□□□ -0.46
Cops4O88544 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.19□□□□□ -0.46
Cops4O88544 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cops4O88544 Gm6736-201ENSMUST00000166583 948 ntBASIC12.19□□□□□ -0.46
Cops4O88544 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.19□□□□□ -0.46
Cops4O88544 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cops4O88544 Gm27702-201ENSMUST00000184512 56 ntBASIC12.19□□□□□ -0.46
Cops4O88544 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cops4O88544 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cops4O88544 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cops4O88544 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cops4O88544 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Cops4O88544 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Cops4O88544 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.19□□□□□ -0.46
Cops4O88544 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Cops4O88544 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cops4O88544 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cops4O88544 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cops4O88544 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cops4O88544 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Cops4O88544 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cops4O88544 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.19□□□□□ -0.46
Cops4O88544 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cops4O88544 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cops4O88544 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.19□□□□□ -0.46
Cops4O88544 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cops4O88544 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cops4O88544 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cops4O88544 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.18□□□□□ -0.46
Cops4O88544 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cops4O88544 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cops4O88544 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.18□□□□□ -0.46
Cops4O88544 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.18□□□□□ -0.46
Cops4O88544 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cops4O88544 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cops4O88544 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cops4O88544 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cops4O88544 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cops4O88544 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cops4O88544 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.18□□□□□ -0.46
Cops4O88544 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cops4O88544 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.18□□□□□ -0.46
Cops4O88544 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cops4O88544 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.18□□□□□ -0.46
Cops4O88544 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cops4O88544 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cops4O88544 Mir449b-201ENSMUST00000104833 80 ntBASIC12.18□□□□□ -0.46
Cops4O88544 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.18□□□□□ -0.46
Cops4O88544 Gm6415-201ENSMUST00000118488 348 ntBASIC12.18□□□□□ -0.46
Cops4O88544 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.18□□□□□ -0.46
Cops4O88544 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cops4O88544 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cops4O88544 Gm5312-201ENSMUST00000203728 547 ntBASIC12.18□□□□□ -0.46
Cops4O88544 Gm6916-202ENSMUST00000205523 195 ntBASIC12.18□□□□□ -0.46
Cops4O88544 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.18□□□□□ -0.46
Cops4O88544 Gm16476-201ENSMUST00000221544 139 ntBASIC12.18□□□□□ -0.46
Cops4O88544 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.18□□□□□ -0.46
Cops4O88544 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cops4O88544 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cops4O88544 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cops4O88544 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cops4O88544 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cops4O88544 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cops4O88544 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cops4O88544 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cops4O88544 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cops4O88544 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.18□□□□□ -0.46
Cops4O88544 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cops4O88544 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cops4O88544 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cops4O88544 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.18□□□□□ -0.46
Cops4O88544 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cops4O88544 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cops4O88544 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cops4O88544 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cops4O88544 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cops4O88544 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Cops4O88544 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cops4O88544 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cops4O88544 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cops4O88544 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Cops4O88544 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cops4O88544 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.17□□□□□ -0.46
Cops4O88544 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cops4O88544 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cops4O88544 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cops4O88544 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cops4O88544 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Cops4O88544 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cops4O88544 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.17□□□□□ -0.46
Cops4O88544 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cops4O88544 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cops4O88544 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cops4O88544 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms