Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clk2O35491 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Clk2O35491 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clk2O35491 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clk2O35491 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clk2O35491 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clk2O35491 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.3□□□□□ -0.12
Clk2O35491 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clk2O35491 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Clk2O35491 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clk2O35491 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clk2O35491 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.29□□□□□ -0.12
Clk2O35491 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.29□□□□□ -0.12
Clk2O35491 CT009713.10-201ENSMUST00000225013 1986 ntBASIC14.29□□□□□ -0.12
Clk2O35491 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clk2O35491 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clk2O35491 Mir1247-201ENSMUST00000116706 82 ntBASIC14.29□□□□□ -0.12
Clk2O35491 Gm9431-201ENSMUST00000119765 1051 ntBASIC14.29□□□□□ -0.12
Clk2O35491 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.29□□□□□ -0.12
Clk2O35491 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clk2O35491 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.29□□□□□ -0.12
Clk2O35491 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.29□□□□□ -0.12
Clk2O35491 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.29□□□□□ -0.12
Clk2O35491 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.29□□□□□ -0.12
Clk2O35491 Mir8109-201ENSMUST00000184375 117 ntBASIC14.29□□□□□ -0.12
Clk2O35491 Gm43179-201ENSMUST00000198797 275 ntBASIC14.29□□□□□ -0.12
Clk2O35491 Gm44772-201ENSMUST00000207623 1191 ntBASIC14.29□□□□□ -0.12
Clk2O35491 AC166051.1-201ENSMUST00000214313 210 ntBASIC14.29□□□□□ -0.12
Clk2O35491 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clk2O35491 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clk2O35491 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clk2O35491 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Clk2O35491 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clk2O35491 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Clk2O35491 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Clk2O35491 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clk2O35491 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clk2O35491 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clk2O35491 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clk2O35491 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clk2O35491 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clk2O35491 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Clk2O35491 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Clk2O35491 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Clk2O35491 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clk2O35491 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clk2O35491 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.29□□□□□ -0.12
Clk2O35491 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clk2O35491 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk2O35491 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clk2O35491 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk2O35491 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.28□□□□□ -0.12
Clk2O35491 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk2O35491 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clk2O35491 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk2O35491 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk2O35491 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk2O35491 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clk2O35491 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk2O35491 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.28□□□□□ -0.12
Clk2O35491 Gm15897-201ENSMUST00000117770 1486 ntBASIC14.28□□□□□ -0.12
Clk2O35491 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk2O35491 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clk2O35491 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.28□□□□□ -0.12
Clk2O35491 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clk2O35491 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.28□□□□□ -0.12
Clk2O35491 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk2O35491 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.28□□□□□ -0.12
Clk2O35491 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clk2O35491 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.28□□□□□ -0.12
Clk2O35491 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC14.28□□□□□ -0.12
Clk2O35491 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.28□□□□□ -0.12
Clk2O35491 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC14.28□□□□□ -0.12
Clk2O35491 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC14.28□□□□□ -0.12
Clk2O35491 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk2O35491 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.28□□□□□ -0.12
Clk2O35491 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk2O35491 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk2O35491 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk2O35491 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk2O35491 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk2O35491 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk2O35491 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Clk2O35491 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk2O35491 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk2O35491 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk2O35491 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk2O35491 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk2O35491 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Clk2O35491 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
Clk2O35491 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.27□□□□□ -0.12
Clk2O35491 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Clk2O35491 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Clk2O35491 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Clk2O35491 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clk2O35491 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Clk2O35491 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Clk2O35491 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.27□□□□□ -0.12
Clk2O35491 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clk2O35491 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms