Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Gm7816-201ENSMUST00000119884 1194 ntBASIC19.9■□□□□ 0.78
Polr1aO35134 Gm15542-201ENSMUST00000121585 1194 ntBASIC19.9■□□□□ 0.78
Polr1aO35134 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC19.9■□□□□ 0.78
Polr1aO35134 Gm12624-201ENSMUST00000177615 382 ntBASIC19.9■□□□□ 0.78
Polr1aO35134 Gm12621-201ENSMUST00000177760 382 ntBASIC19.9■□□□□ 0.78
Polr1aO35134 Gm12615-201ENSMUST00000177970 382 ntBASIC19.9■□□□□ 0.78
Polr1aO35134 Gm12622-201ENSMUST00000177975 382 ntBASIC19.9■□□□□ 0.78
Polr1aO35134 Gm12627-201ENSMUST00000178412 382 ntBASIC19.9■□□□□ 0.78
Polr1aO35134 Gm12625-201ENSMUST00000179122 382 ntBASIC19.9■□□□□ 0.78
Polr1aO35134 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Polr1aO35134 Gm12614-201ENSMUST00000179586 382 ntBASIC19.9■□□□□ 0.78
Polr1aO35134 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC19.9■□□□□ 0.78
Polr1aO35134 Gm12613-201ENSMUST00000180323 382 ntBASIC19.9■□□□□ 0.78
Polr1aO35134 Gm9230-201ENSMUST00000188228 532 ntBASIC19.9■□□□□ 0.78
Polr1aO35134 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
Polr1aO35134 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Polr1aO35134 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Polr1aO35134 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Polr1aO35134 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Polr1aO35134 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Polr1aO35134 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Polr1aO35134 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Polr1aO35134 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Polr1aO35134 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Polr1aO35134 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Polr1aO35134 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Polr1aO35134 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Polr1aO35134 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Polr1aO35134 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Polr1aO35134 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Polr1aO35134 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Polr1aO35134 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Polr1aO35134 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Polr1aO35134 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC19.9■□□□□ 0.78
Polr1aO35134 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Polr1aO35134 Gm23119-201ENSMUST00000158610 140 ntBASIC19.9■□□□□ 0.78
Polr1aO35134 Gm43962-201ENSMUST00000203898 190 ntBASIC19.9■□□□□ 0.78
Polr1aO35134 Gm10109-202ENSMUST00000206890 1211 ntBASIC19.9■□□□□ 0.78
Polr1aO35134 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
Polr1aO35134 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Polr1aO35134 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Polr1aO35134 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Polr1aO35134 Gm43056-201ENSMUST00000197865 2791 ntBASIC19.9■□□□□ 0.78
Polr1aO35134 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Polr1aO35134 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Polr1aO35134 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Polr1aO35134 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Polr1aO35134 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Polr1aO35134 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Polr1aO35134 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC19.89■□□□□ 0.77
Polr1aO35134 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Polr1aO35134 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Polr1aO35134 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC19.89■□□□□ 0.77
Polr1aO35134 Gm20426-201ENSMUST00000173657 440 ntBASIC19.89■□□□□ 0.77
Polr1aO35134 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Polr1aO35134 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Polr1aO35134 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Polr1aO35134 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Polr1aO35134 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Polr1aO35134 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC19.89■□□□□ 0.77
Polr1aO35134 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Polr1aO35134 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Polr1aO35134 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Polr1aO35134 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Polr1aO35134 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Polr1aO35134 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Polr1aO35134 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Polr1aO35134 Rmrp-201ENSMUST00000157463 271 ntBASIC19.88■□□□□ 0.77
Polr1aO35134 Gm7467-201ENSMUST00000185173 652 ntBASIC19.88■□□□□ 0.77
Polr1aO35134 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC19.88■□□□□ 0.77
Polr1aO35134 Gm42937-201ENSMUST00000197360 752 ntBASIC19.88■□□□□ 0.77
Polr1aO35134 AY036118-201ENSMUST00000200021 923 ntBASIC19.88■□□□□ 0.77
Polr1aO35134 Gm44136-201ENSMUST00000203819 1106 ntBASIC19.88■□□□□ 0.77
Polr1aO35134 Spcs1-203ENSMUST00000226374 592 ntBASIC19.88■□□□□ 0.77
Polr1aO35134 AL732506.1-201ENSMUST00000226420 281 ntBASIC19.88■□□□□ 0.77
Polr1aO35134 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC19.88■□□□□ 0.77
Polr1aO35134 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Polr1aO35134 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Polr1aO35134 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC19.88■□□□□ 0.77
Polr1aO35134 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Polr1aO35134 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Polr1aO35134 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Polr1aO35134 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Polr1aO35134 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC19.88■□□□□ 0.77
Polr1aO35134 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Polr1aO35134 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Polr1aO35134 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Polr1aO35134 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Polr1aO35134 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Polr1aO35134 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC19.88■□□□□ 0.77
Polr1aO35134 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Polr1aO35134 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Polr1aO35134 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Polr1aO35134 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Polr1aO35134 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Polr1aO35134 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Polr1aO35134 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC19.87■□□□□ 0.77
Polr1aO35134 CT025610.1-201ENSMUST00000224552 1786 ntBASIC19.87■□□□□ 0.77
Polr1aO35134 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC19.87■□□□□ 0.77
Polr1aO35134 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms