Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tcof1O08784 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tcof1O08784 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tcof1O08784 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Tcof1O08784 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tcof1O08784 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC15.44■□□□□ 0.06
Tcof1O08784 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tcof1O08784 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tcof1O08784 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tcof1O08784 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC15.44■□□□□ 0.06
Tcof1O08784 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tcof1O08784 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tcof1O08784 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tcof1O08784 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC15.44■□□□□ 0.06
Tcof1O08784 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Tcof1O08784 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tcof1O08784 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC15.44■□□□□ 0.06
Tcof1O08784 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tcof1O08784 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tcof1O08784 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tcof1O08784 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tcof1O08784 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Tcof1O08784 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC15.44■□□□□ 0.06
Tcof1O08784 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tcof1O08784 Gm5466-201ENSMUST00000119395 1890 ntBASIC15.44■□□□□ 0.06
Tcof1O08784 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC15.44■□□□□ 0.06
Tcof1O08784 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tcof1O08784 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tcof1O08784 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC15.43■□□□□ 0.06
Tcof1O08784 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC15.43■□□□□ 0.06
Tcof1O08784 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Tcof1O08784 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Tcof1O08784 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC15.43■□□□□ 0.06
Tcof1O08784 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
Tcof1O08784 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Tcof1O08784 Gm43818-201ENSMUST00000200605 466 ntBASIC15.43■□□□□ 0.06
Tcof1O08784 Gm2824-203ENSMUST00000226189 1228 ntBASIC15.43■□□□□ 0.06
Tcof1O08784 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Tcof1O08784 Gm8399-201ENSMUST00000082300 1117 ntBASIC15.43■□□□□ 0.06
Tcof1O08784 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Tcof1O08784 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC15.43■□□□□ 0.06
Tcof1O08784 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Tcof1O08784 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tcof1O08784 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tcof1O08784 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Tcof1O08784 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tcof1O08784 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tcof1O08784 Gm14608-201ENSMUST00000120030 1553 ntBASIC15.43■□□□□ 0.06
Tcof1O08784 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tcof1O08784 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Tcof1O08784 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tcof1O08784 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tcof1O08784 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Tcof1O08784 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tcof1O08784 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
Tcof1O08784 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Tcof1O08784 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Tcof1O08784 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Tcof1O08784 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tcof1O08784 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC15.43■□□□□ 0.06
Tcof1O08784 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tcof1O08784 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tcof1O08784 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tcof1O08784 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tcof1O08784 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tcof1O08784 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tcof1O08784 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Tcof1O08784 Gm8805-201ENSMUST00000117848 313 ntBASIC15.43■□□□□ 0.06
Tcof1O08784 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC15.43■□□□□ 0.06
Tcof1O08784 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC15.43■□□□□ 0.06
Tcof1O08784 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Tcof1O08784 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Tcof1O08784 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Tcof1O08784 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tcof1O08784 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tcof1O08784 Dctn4-202ENSMUST00000223590 1530 ntBASIC15.42■□□□□ 0.06
Tcof1O08784 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tcof1O08784 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Tcof1O08784 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tcof1O08784 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Tcof1O08784 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Tcof1O08784 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tcof1O08784 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tcof1O08784 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Tcof1O08784 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tcof1O08784 Gm10339-203ENSMUST00000225409 1671 ntBASIC15.42■□□□□ 0.06
Tcof1O08784 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tcof1O08784 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tcof1O08784 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Tcof1O08784 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.42■□□□□ 0.06
Tcof1O08784 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Tcof1O08784 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Tcof1O08784 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tcof1O08784 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Tcof1O08784 Mir1247-201ENSMUST00000116706 82 ntBASIC15.42■□□□□ 0.06
Tcof1O08784 Gm15198-201ENSMUST00000117283 177 ntBASIC15.42■□□□□ 0.06
Tcof1O08784 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC15.42■□□□□ 0.06
Tcof1O08784 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Tcof1O08784 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tcof1O08784 AC126253.1-201ENSMUST00000227974 824 ntBASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms