Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim55G3X8Y1 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trim55G3X8Y1 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim55G3X8Y1 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.55□□□□□ -0.24
Trim55G3X8Y1 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim55G3X8Y1 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim55G3X8Y1 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim55G3X8Y1 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim55G3X8Y1 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim55G3X8Y1 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC13.54□□□□□ -0.24
Trim55G3X8Y1 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim55G3X8Y1 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Trim55G3X8Y1 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim55G3X8Y1 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim55G3X8Y1 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim55G3X8Y1 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trim55G3X8Y1 Gm45532-201ENSMUST00000210342 3620 ntBASIC13.54□□□□□ -0.24
Trim55G3X8Y1 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim55G3X8Y1 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim55G3X8Y1 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.54□□□□□ -0.24
Trim55G3X8Y1 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim55G3X8Y1 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.54□□□□□ -0.24
Trim55G3X8Y1 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim55G3X8Y1 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.54□□□□□ -0.24
Trim55G3X8Y1 Mir5126-201ENSMUST00000175513 77 ntBASIC13.54□□□□□ -0.24
Trim55G3X8Y1 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.54□□□□□ -0.24
Trim55G3X8Y1 Gm4535-201ENSMUST00000182274 558 ntBASIC13.54□□□□□ -0.24
Trim55G3X8Y1 Gm2445-201ENSMUST00000182798 989 ntBASIC13.54□□□□□ -0.24
Trim55G3X8Y1 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.54□□□□□ -0.24
Trim55G3X8Y1 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.54□□□□□ -0.24
Trim55G3X8Y1 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim55G3X8Y1 Gm10355-201ENSMUST00000097146 517 ntBASIC13.54□□□□□ -0.24
Trim55G3X8Y1 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim55G3X8Y1 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trim55G3X8Y1 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim55G3X8Y1 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trim55G3X8Y1 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.54□□□□□ -0.24
Trim55G3X8Y1 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trim55G3X8Y1 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 Gm25990-201ENSMUST00000102440 86 ntBASIC13.53□□□□□ -0.24
Trim55G3X8Y1 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 Gm10275-202ENSMUST00000168697 495 ntBASIC13.53□□□□□ -0.24
Trim55G3X8Y1 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 Gm10275-201ENSMUST00000092620 635 ntBASIC13.53□□□□□ -0.24
Trim55G3X8Y1 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.53□□□□□ -0.24
Trim55G3X8Y1 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim55G3X8Y1 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Trim55G3X8Y1 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Trim55G3X8Y1 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trim55G3X8Y1 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.52□□□□□ -0.24
Trim55G3X8Y1 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim55G3X8Y1 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim55G3X8Y1 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Trim55G3X8Y1 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.52□□□□□ -0.24
Trim55G3X8Y1 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim55G3X8Y1 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim55G3X8Y1 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Trim55G3X8Y1 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim55G3X8Y1 Gm13418-201ENSMUST00000119097 944 ntBASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms