Protein–RNA interactions for Protein: E9Q043

Fndc1, Fibronectin type III domain-containing 1, mousemouse

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc1E9Q043 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Fndc1E9Q043 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Fndc1E9Q043 Gm11989-201ENSMUST00000117240 672 ntBASIC18.83■□□□□ 0.6
Fndc1E9Q043 Gm11362-201ENSMUST00000118838 850 ntBASIC18.83■□□□□ 0.6
Fndc1E9Q043 Gm15036-201ENSMUST00000118880 400 ntBASIC18.83■□□□□ 0.6
Fndc1E9Q043 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Fndc1E9Q043 Mir8115-201ENSMUST00000184992 119 ntBASIC18.83■□□□□ 0.6
Fndc1E9Q043 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC18.83■□□□□ 0.6
Fndc1E9Q043 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC18.83■□□□□ 0.6
Fndc1E9Q043 Gm807-202ENSMUST00000224929 408 ntBASIC18.83■□□□□ 0.6
Fndc1E9Q043 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Fndc1E9Q043 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Fndc1E9Q043 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Fndc1E9Q043 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fndc1E9Q043 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fndc1E9Q043 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Fndc1E9Q043 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fndc1E9Q043 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fndc1E9Q043 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Fndc1E9Q043 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Fndc1E9Q043 Gm42941-201ENSMUST00000200347 1321 ntBASIC18.82■□□□□ 0.6
Fndc1E9Q043 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fndc1E9Q043 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC18.82■□□□□ 0.6
Fndc1E9Q043 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC18.82■□□□□ 0.6
Fndc1E9Q043 Gm14585-201ENSMUST00000120713 634 ntBASIC18.82■□□□□ 0.6
Fndc1E9Q043 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Fndc1E9Q043 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Fndc1E9Q043 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Fndc1E9Q043 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Fndc1E9Q043 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Fndc1E9Q043 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Fndc1E9Q043 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Fndc1E9Q043 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Fndc1E9Q043 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Fndc1E9Q043 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Fndc1E9Q043 Gm3619-201ENSMUST00000219947 775 ntBASIC18.82■□□□□ 0.6
Fndc1E9Q043 AC154252.2-201ENSMUST00000223593 767 ntBASIC18.82■□□□□ 0.6
Fndc1E9Q043 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Fndc1E9Q043 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fndc1E9Q043 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Fndc1E9Q043 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Fndc1E9Q043 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Fndc1E9Q043 Mmp14-206ENSMUST00000225641 3238 ntBASIC18.82■□□□□ 0.6
Fndc1E9Q043 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Fndc1E9Q043 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Fndc1E9Q043 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fndc1E9Q043 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fndc1E9Q043 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fndc1E9Q043 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.81■□□□□ 0.6
Fndc1E9Q043 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fndc1E9Q043 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fndc1E9Q043 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Fndc1E9Q043 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fndc1E9Q043 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Fndc1E9Q043 Ighv2-1-201ENSMUST00000170946 353 ntBASIC18.81■□□□□ 0.6
Fndc1E9Q043 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Fndc1E9Q043 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC18.81■□□□□ 0.6
Fndc1E9Q043 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC18.81■□□□□ 0.6
Fndc1E9Q043 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC18.81■□□□□ 0.6
Fndc1E9Q043 AC122408.1-201ENSMUST00000218949 218 ntBASIC18.81■□□□□ 0.6
Fndc1E9Q043 Olfr1347-205ENSMUST00000220413 964 ntBASIC18.81■□□□□ 0.6
Fndc1E9Q043 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Fndc1E9Q043 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Fndc1E9Q043 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fndc1E9Q043 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fndc1E9Q043 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fndc1E9Q043 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fndc1E9Q043 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fndc1E9Q043 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fndc1E9Q043 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Fndc1E9Q043 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Fndc1E9Q043 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fndc1E9Q043 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fndc1E9Q043 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Fndc1E9Q043 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fndc1E9Q043 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fndc1E9Q043 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Fndc1E9Q043 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fndc1E9Q043 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC18.8■□□□□ 0.6
Fndc1E9Q043 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC18.8■□□□□ 0.6
Fndc1E9Q043 Gm27910-201ENSMUST00000185004 107 ntBASIC18.8■□□□□ 0.6
Fndc1E9Q043 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC18.8■□□□□ 0.6
Fndc1E9Q043 Gm37299-201ENSMUST00000193951 826 ntBASIC18.8■□□□□ 0.6
Fndc1E9Q043 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC18.8■□□□□ 0.6
Fndc1E9Q043 Mir339-201ENSMUST00000083659 96 ntBASIC18.8■□□□□ 0.6
Fndc1E9Q043 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Fndc1E9Q043 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Fndc1E9Q043 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fndc1E9Q043 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fndc1E9Q043 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Fndc1E9Q043 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC18.8■□□□□ 0.6
Fndc1E9Q043 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fndc1E9Q043 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fndc1E9Q043 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fndc1E9Q043 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Fndc1E9Q043 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Fndc1E9Q043 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Fndc1E9Q043 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC18.8■□□□□ 0.6
Fndc1E9Q043 Gm3332-201ENSMUST00000189337 928 ntBASIC18.8■□□□□ 0.6
Fndc1E9Q043 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms