Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm38266-201ENSMUST00000194931 421 ntBASIC13.02□□□□□ -0.33
Srp54bE9PXC0 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.02□□□□□ -0.33
Srp54bE9PXC0 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Srp54bE9PXC0 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Srp54bE9PXC0 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Srp54bE9PXC0 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Srp54bE9PXC0 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.02□□□□□ -0.33
Srp54bE9PXC0 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Srp54bE9PXC0 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Srp54bE9PXC0 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.02□□□□□ -0.33
Srp54bE9PXC0 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.02□□□□□ -0.33
Srp54bE9PXC0 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Srp54bE9PXC0 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Srp54bE9PXC0 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Srp54bE9PXC0 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Srp54bE9PXC0 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Srp54bE9PXC0 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.02□□□□□ -0.33
Srp54bE9PXC0 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Srp54bE9PXC0 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Srp54bE9PXC0 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Srp54bE9PXC0 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Srp54bE9PXC0 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Srp54bE9PXC0 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Srp54bE9PXC0 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Srp54bE9PXC0 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.01□□□□□ -0.33
Srp54bE9PXC0 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Srp54bE9PXC0 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Srp54bE9PXC0 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Srp54bE9PXC0 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Srp54bE9PXC0 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Srp54bE9PXC0 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Srp54bE9PXC0 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.01□□□□□ -0.33
Srp54bE9PXC0 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.01□□□□□ -0.33
Srp54bE9PXC0 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.01□□□□□ -0.33
Srp54bE9PXC0 Gm14723-201ENSMUST00000118686 215 ntBASIC13.01□□□□□ -0.33
Srp54bE9PXC0 Gm11637-201ENSMUST00000120601 592 ntBASIC13.01□□□□□ -0.33
Srp54bE9PXC0 Gm16479-201ENSMUST00000121706 932 ntBASIC13.01□□□□□ -0.33
Srp54bE9PXC0 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Srp54bE9PXC0 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.01□□□□□ -0.33
Srp54bE9PXC0 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.01□□□□□ -0.33
Srp54bE9PXC0 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.01□□□□□ -0.33
Srp54bE9PXC0 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Srp54bE9PXC0 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.01□□□□□ -0.33
Srp54bE9PXC0 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.01□□□□□ -0.33
Srp54bE9PXC0 Gm45930-201ENSMUST00000221330 292 ntBASIC13.01□□□□□ -0.33
Srp54bE9PXC0 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Srp54bE9PXC0 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Srp54bE9PXC0 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Srp54bE9PXC0 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.01□□□□□ -0.33
Srp54bE9PXC0 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.01□□□□□ -0.33
Srp54bE9PXC0 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Srp54bE9PXC0 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Srp54bE9PXC0 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Srp54bE9PXC0 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Srp54bE9PXC0 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Srp54bE9PXC0 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Srp54bE9PXC0 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Srp54bE9PXC0 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Srp54bE9PXC0 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Srp54bE9PXC0 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Srp54bE9PXC0 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.01□□□□□ -0.33
Srp54bE9PXC0 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Srp54bE9PXC0 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Srp54bE9PXC0 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.01□□□□□ -0.33
Srp54bE9PXC0 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Srp54bE9PXC0 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13□□□□□ -0.33
Srp54bE9PXC0 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Srp54bE9PXC0 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Srp54bE9PXC0 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Srp54bE9PXC0 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Srp54bE9PXC0 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Srp54bE9PXC0 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Srp54bE9PXC0 Gm43273-201ENSMUST00000199649 2594 ntBASIC13□□□□□ -0.33
Srp54bE9PXC0 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Srp54bE9PXC0 Gm42748-201ENSMUST00000199354 2341 ntBASIC13□□□□□ -0.33
Srp54bE9PXC0 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Srp54bE9PXC0 Gm43423-201ENSMUST00000198390 2094 ntBASIC13□□□□□ -0.33
Srp54bE9PXC0 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Srp54bE9PXC0 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Srp54bE9PXC0 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13□□□□□ -0.33
Srp54bE9PXC0 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Srp54bE9PXC0 Gm18244-201ENSMUST00000219747 1566 ntBASIC13□□□□□ -0.33
Srp54bE9PXC0 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Srp54bE9PXC0 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13□□□□□ -0.33
Srp54bE9PXC0 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Srp54bE9PXC0 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13□□□□□ -0.33
Srp54bE9PXC0 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13□□□□□ -0.33
Srp54bE9PXC0 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Srp54bE9PXC0 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13□□□□□ -0.33
Srp54bE9PXC0 Gm26185-201ENSMUST00000157692 266 ntBASIC13□□□□□ -0.33
Srp54bE9PXC0 Gm43822-201ENSMUST00000200285 476 ntBASIC13□□□□□ -0.33
Srp54bE9PXC0 Gm3961-201ENSMUST00000204425 994 ntBASIC13□□□□□ -0.33
Srp54bE9PXC0 AC154462.2-201ENSMUST00000227519 370 ntBASIC13□□□□□ -0.33
Srp54bE9PXC0 Rassf8-202ENSMUST00000058538 1131 ntBASIC13□□□□□ -0.33
Srp54bE9PXC0 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Srp54bE9PXC0 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13□□□□□ -0.33
Srp54bE9PXC0 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Srp54bE9PXC0 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Srp54bE9PXC0 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13□□□□□ -0.33
Srp54bE9PXC0 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms