Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hfm1D3Z4R1 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Hfm1D3Z4R1 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC18.22■□□□□ 0.51
Hfm1D3Z4R1 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hfm1D3Z4R1 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hfm1D3Z4R1 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hfm1D3Z4R1 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hfm1D3Z4R1 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hfm1D3Z4R1 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hfm1D3Z4R1 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hfm1D3Z4R1 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC18.21■□□□□ 0.51
Hfm1D3Z4R1 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hfm1D3Z4R1 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hfm1D3Z4R1 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hfm1D3Z4R1 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hfm1D3Z4R1 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hfm1D3Z4R1 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hfm1D3Z4R1 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hfm1D3Z4R1 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hfm1D3Z4R1 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hfm1D3Z4R1 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hfm1D3Z4R1 Gm12314-201ENSMUST00000118104 538 ntBASIC18.21■□□□□ 0.51
Hfm1D3Z4R1 Gm6506-201ENSMUST00000119775 1136 ntBASIC18.21■□□□□ 0.51
Hfm1D3Z4R1 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hfm1D3Z4R1 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
Hfm1D3Z4R1 AC154849.4-201ENSMUST00000224868 365 ntBASIC18.21■□□□□ 0.51
Hfm1D3Z4R1 AC140293.1-201ENSMUST00000225626 1247 ntBASIC18.21■□□□□ 0.51
Hfm1D3Z4R1 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC18.21■□□□□ 0.51
Hfm1D3Z4R1 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hfm1D3Z4R1 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hfm1D3Z4R1 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hfm1D3Z4R1 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hfm1D3Z4R1 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Hfm1D3Z4R1 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Hfm1D3Z4R1 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
Hfm1D3Z4R1 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hfm1D3Z4R1 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Hfm1D3Z4R1 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hfm1D3Z4R1 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hfm1D3Z4R1 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hfm1D3Z4R1 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hfm1D3Z4R1 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hfm1D3Z4R1 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hfm1D3Z4R1 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hfm1D3Z4R1 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hfm1D3Z4R1 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hfm1D3Z4R1 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hfm1D3Z4R1 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hfm1D3Z4R1 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hfm1D3Z4R1 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Hfm1D3Z4R1 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Hfm1D3Z4R1 Gm15711-201ENSMUST00000118889 535 ntBASIC18.2■□□□□ 0.5
Hfm1D3Z4R1 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hfm1D3Z4R1 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hfm1D3Z4R1 AC122876.1-201ENSMUST00000217619 825 ntBASIC18.2■□□□□ 0.5
Hfm1D3Z4R1 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC18.2■□□□□ 0.5
Hfm1D3Z4R1 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hfm1D3Z4R1 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hfm1D3Z4R1 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hfm1D3Z4R1 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Hfm1D3Z4R1 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hfm1D3Z4R1 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hfm1D3Z4R1 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hfm1D3Z4R1 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hfm1D3Z4R1 Gm13035-201ENSMUST00000117496 342 ntBASIC18.19■□□□□ 0.5
Hfm1D3Z4R1 Gm27627-201ENSMUST00000183644 150 ntBASIC18.19■□□□□ 0.5
Hfm1D3Z4R1 Gm19994-201ENSMUST00000217086 586 ntBASIC18.19■□□□□ 0.5
Hfm1D3Z4R1 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hfm1D3Z4R1 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hfm1D3Z4R1 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hfm1D3Z4R1 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hfm1D3Z4R1 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Hfm1D3Z4R1 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hfm1D3Z4R1 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC18.19■□□□□ 0.5
Hfm1D3Z4R1 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Hfm1D3Z4R1 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hfm1D3Z4R1 AC159308.2-201ENSMUST00000213592 2325 ntBASIC18.18■□□□□ 0.5
Hfm1D3Z4R1 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hfm1D3Z4R1 Gm11941-201ENSMUST00000119904 610 ntBASIC18.18■□□□□ 0.5
Hfm1D3Z4R1 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC18.18■□□□□ 0.5
Hfm1D3Z4R1 Gm10051-201ENSMUST00000145209 414 ntBASIC18.18■□□□□ 0.5
Hfm1D3Z4R1 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hfm1D3Z4R1 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hfm1D3Z4R1 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC18.18■□□□□ 0.5
Hfm1D3Z4R1 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hfm1D3Z4R1 AC166992.1-201ENSMUST00000216356 565 ntBASIC18.18■□□□□ 0.5
Hfm1D3Z4R1 AC163667.3-201ENSMUST00000225774 222 ntBASIC18.18■□□□□ 0.5
Hfm1D3Z4R1 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC18.18■□□□□ 0.5
Hfm1D3Z4R1 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hfm1D3Z4R1 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hfm1D3Z4R1 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hfm1D3Z4R1 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Hfm1D3Z4R1 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hfm1D3Z4R1 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hfm1D3Z4R1 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hfm1D3Z4R1 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hfm1D3Z4R1 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hfm1D3Z4R1 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hfm1D3Z4R1 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Hfm1D3Z4R1 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms