Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp42B2RQC2 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Usp42B2RQC2 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp42B2RQC2 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp42B2RQC2 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp42B2RQC2 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp42B2RQC2 Mir686-201ENSMUST00000102174 109 ntBASIC15.42■□□□□ 0.06
Usp42B2RQC2 Gm8805-201ENSMUST00000117848 313 ntBASIC15.42■□□□□ 0.06
Usp42B2RQC2 Gm13369-201ENSMUST00000119442 987 ntBASIC15.42■□□□□ 0.06
Usp42B2RQC2 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Usp42B2RQC2 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp42B2RQC2 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC15.42■□□□□ 0.06
Usp42B2RQC2 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC15.42■□□□□ 0.06
Usp42B2RQC2 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC15.42■□□□□ 0.06
Usp42B2RQC2 Gm6458-201ENSMUST00000211573 635 ntBASIC15.42■□□□□ 0.06
Usp42B2RQC2 Gm2824-203ENSMUST00000226189 1228 ntBASIC15.42■□□□□ 0.06
Usp42B2RQC2 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Usp42B2RQC2 Gm38042-201ENSMUST00000191614 5208 ntBASIC15.42■□□□□ 0.06
Usp42B2RQC2 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Usp42B2RQC2 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp42B2RQC2 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Usp42B2RQC2 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp42B2RQC2 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Usp42B2RQC2 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp42B2RQC2 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Usp42B2RQC2 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Usp42B2RQC2 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp42B2RQC2 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Usp42B2RQC2 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC15.41■□□□□ 0.06
Usp42B2RQC2 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Usp42B2RQC2 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Usp42B2RQC2 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Usp42B2RQC2 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp42B2RQC2 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC15.41■□□□□ 0.06
Usp42B2RQC2 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC15.41■□□□□ 0.06
Usp42B2RQC2 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Usp42B2RQC2 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp42B2RQC2 Gm14608-201ENSMUST00000120030 1553 ntBASIC15.41■□□□□ 0.06
Usp42B2RQC2 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp42B2RQC2 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Usp42B2RQC2 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Usp42B2RQC2 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Usp42B2RQC2 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp42B2RQC2 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Usp42B2RQC2 Gm12390-201ENSMUST00000117897 397 ntBASIC15.41■□□□□ 0.06
Usp42B2RQC2 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Usp42B2RQC2 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC15.41■□□□□ 0.06
Usp42B2RQC2 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC15.41■□□□□ 0.06
Usp42B2RQC2 Gm29127-201ENSMUST00000188304 517 ntBASIC15.41■□□□□ 0.06
Usp42B2RQC2 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC15.41■□□□□ 0.06
Usp42B2RQC2 Gm29705-201ENSMUST00000212598 474 ntBASIC15.41■□□□□ 0.06
Usp42B2RQC2 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Usp42B2RQC2 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Usp42B2RQC2 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Usp42B2RQC2 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp42B2RQC2 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp42B2RQC2 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Usp42B2RQC2 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Usp42B2RQC2 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Usp42B2RQC2 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp42B2RQC2 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC15.4■□□□□ 0.06
Usp42B2RQC2 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Usp42B2RQC2 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp42B2RQC2 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC15.4■□□□□ 0.06
Usp42B2RQC2 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Usp42B2RQC2 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp42B2RQC2 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp42B2RQC2 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Usp42B2RQC2 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp42B2RQC2 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp42B2RQC2 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp42B2RQC2 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Usp42B2RQC2 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp42B2RQC2 Zscan30-202ENSMUST00000224144 1458 ntBASIC15.4■□□□□ 0.06
Usp42B2RQC2 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Usp42B2RQC2 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Usp42B2RQC2 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC15.4■□□□□ 0.06
Usp42B2RQC2 Gm4271-201ENSMUST00000174444 973 ntBASIC15.4■□□□□ 0.06
Usp42B2RQC2 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Usp42B2RQC2 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC15.4■□□□□ 0.06
Usp42B2RQC2 AC132467.2-202ENSMUST00000227726 559 ntBASIC15.4■□□□□ 0.06
Usp42B2RQC2 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp42B2RQC2 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp42B2RQC2 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp42B2RQC2 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Usp42B2RQC2 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
Usp42B2RQC2 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp42B2RQC2 Gm44851-201ENSMUST00000205735 2309 ntBASIC15.39■□□□□ 0.05
Usp42B2RQC2 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Usp42B2RQC2 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Usp42B2RQC2 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp42B2RQC2 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp42B2RQC2 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp42B2RQC2 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp42B2RQC2 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp42B2RQC2 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp42B2RQC2 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC15.39■□□□□ 0.05
Usp42B2RQC2 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Usp42B2RQC2 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Usp42B2RQC2 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms