Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Gm12887B1AVM1 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm12887B1AVM1 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Gm12887B1AVM1 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm12887B1AVM1 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Gm12887B1AVM1 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Gm12887B1AVM1 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm12887B1AVM1 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Gm12887B1AVM1 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Gm12887B1AVM1 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm12887B1AVM1 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Gm12887B1AVM1 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Gm12887B1AVM1 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Gm12887B1AVM1 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm12887B1AVM1 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm12887B1AVM1 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm12887B1AVM1 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC10.66□□□□□ -0.7
Gm12887B1AVM1 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm12887B1AVM1 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Gm12887B1AVM1 Gm9719-201ENSMUST00000162765 543 ntBASIC10.66□□□□□ -0.7
Gm12887B1AVM1 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC10.66□□□□□ -0.7
Gm12887B1AVM1 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Gm12887B1AVM1 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Gm12887B1AVM1 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Gm12887B1AVM1 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC10.66□□□□□ -0.7
Gm12887B1AVM1 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC10.66□□□□□ -0.7
Gm12887B1AVM1 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC10.66□□□□□ -0.7
Gm12887B1AVM1 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC10.66□□□□□ -0.7
Gm12887B1AVM1 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm12887B1AVM1 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm12887B1AVM1 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm12887B1AVM1 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm12887B1AVM1 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm12887B1AVM1 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.66□□□□□ -0.7
Gm12887B1AVM1 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Gm12887B1AVM1 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm12887B1AVM1 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.66□□□□□ -0.7
Gm12887B1AVM1 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm12887B1AVM1 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm12887B1AVM1 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm12887B1AVM1 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm12887B1AVM1 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm12887B1AVM1 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm12887B1AVM1 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Gm12887B1AVM1 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Gm12887B1AVM1 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.65□□□□□ -0.7
Gm12887B1AVM1 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm12887B1AVM1 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm12887B1AVM1 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm12887B1AVM1 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm12887B1AVM1 Gm3052-202ENSMUST00000188254 2224 ntBASIC10.65□□□□□ -0.7
Gm12887B1AVM1 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm12887B1AVM1 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm12887B1AVM1 Nrn1-204ENSMUST00000224323 1779 ntBASIC10.65□□□□□ -0.7
Gm12887B1AVM1 Gm6018-201ENSMUST00000216090 1306 ntBASIC10.65□□□□□ -0.7
Gm12887B1AVM1 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm12887B1AVM1 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm12887B1AVM1 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm12887B1AVM1 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm12887B1AVM1 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm12887B1AVM1 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC10.65□□□□□ -0.7
Gm12887B1AVM1 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm12887B1AVM1 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm12887B1AVM1 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm12887B1AVM1 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm12887B1AVM1 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm12887B1AVM1 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm12887B1AVM1 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm12887B1AVM1 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC10.65□□□□□ -0.7
Gm12887B1AVM1 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC10.65□□□□□ -0.7
Gm12887B1AVM1 Gm21470-201ENSMUST00000187680 696 ntBASIC10.65□□□□□ -0.7
Gm12887B1AVM1 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm12887B1AVM1 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC10.65□□□□□ -0.7
Gm12887B1AVM1 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC10.65□□□□□ -0.7
Gm12887B1AVM1 Psmb5-202ENSMUST00000227257 622 ntBASIC10.65□□□□□ -0.7
Gm12887B1AVM1 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm12887B1AVM1 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.65□□□□□ -0.7
Gm12887B1AVM1 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm12887B1AVM1 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Gm12887B1AVM1 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm12887B1AVM1 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Gm12887B1AVM1 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm12887B1AVM1 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.65□□□□□ -0.7
Gm12887B1AVM1 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm12887B1AVM1 Gm43045-201ENSMUST00000198725 2095 ntBASIC10.65□□□□□ -0.7
Gm12887B1AVM1 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Gm12887B1AVM1 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Gm12887B1AVM1 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.71
Gm12887B1AVM1 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Gm12887B1AVM1 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Gm12887B1AVM1 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.65□□□□□ -0.71
Gm12887B1AVM1 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Gm12887B1AVM1 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Gm12887B1AVM1 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Gm12887B1AVM1 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
Gm12887B1AVM1 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms