Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn1aA2APX8 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scn1aA2APX8 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.77□□□□□ -0.21
Scn1aA2APX8 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn1aA2APX8 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.77□□□□□ -0.21
Scn1aA2APX8 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn1aA2APX8 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn1aA2APX8 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn1aA2APX8 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn1aA2APX8 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn1aA2APX8 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Scn1aA2APX8 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn1aA2APX8 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn1aA2APX8 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn1aA2APX8 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn1aA2APX8 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.77□□□□□ -0.21
Scn1aA2APX8 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn1aA2APX8 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.76□□□□□ -0.21
Scn1aA2APX8 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Scn1aA2APX8 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.76□□□□□ -0.21
Scn1aA2APX8 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn1aA2APX8 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.76□□□□□ -0.21
Scn1aA2APX8 Gm24548-201ENSMUST00000158650 108 ntBASIC13.76□□□□□ -0.21
Scn1aA2APX8 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scn1aA2APX8 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.76□□□□□ -0.21
Scn1aA2APX8 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn1aA2APX8 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn1aA2APX8 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn1aA2APX8 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn1aA2APX8 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Scn1aA2APX8 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.76□□□□□ -0.21
Scn1aA2APX8 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn1aA2APX8 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scn1aA2APX8 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.76□□□□□ -0.21
Scn1aA2APX8 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn1aA2APX8 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Scn1aA2APX8 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.76□□□□□ -0.21
Scn1aA2APX8 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Scn1aA2APX8 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.76□□□□□ -0.21
Scn1aA2APX8 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn1aA2APX8 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.76□□□□□ -0.21
Scn1aA2APX8 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.76□□□□□ -0.21
Scn1aA2APX8 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Scn1aA2APX8 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn1aA2APX8 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scn1aA2APX8 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn1aA2APX8 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn1aA2APX8 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn1aA2APX8 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.76□□□□□ -0.21
Scn1aA2APX8 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.76□□□□□ -0.21
Scn1aA2APX8 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Scn1aA2APX8 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.76□□□□□ -0.21
Scn1aA2APX8 Mir339-201ENSMUST00000083659 96 ntBASIC13.76□□□□□ -0.21
Scn1aA2APX8 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Scn1aA2APX8 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn1aA2APX8 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn1aA2APX8 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn1aA2APX8 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn1aA2APX8 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn1aA2APX8 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.76□□□□□ -0.21
Scn1aA2APX8 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Scn1aA2APX8 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn1aA2APX8 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn1aA2APX8 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn1aA2APX8 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Scn1aA2APX8 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Scn1aA2APX8 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.75□□□□□ -0.21
Scn1aA2APX8 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Scn1aA2APX8 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Scn1aA2APX8 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.75□□□□□ -0.21
Scn1aA2APX8 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn1aA2APX8 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn1aA2APX8 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn1aA2APX8 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
Scn1aA2APX8 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn1aA2APX8 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn1aA2APX8 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Scn1aA2APX8 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Scn1aA2APX8 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn1aA2APX8 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.75□□□□□ -0.21
Scn1aA2APX8 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.75□□□□□ -0.21
Scn1aA2APX8 Gm27516-201ENSMUST00000184237 98 ntBASIC13.75□□□□□ -0.21
Scn1aA2APX8 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.75□□□□□ -0.21
Scn1aA2APX8 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.75□□□□□ -0.21
Scn1aA2APX8 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.75□□□□□ -0.21
Scn1aA2APX8 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn1aA2APX8 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn1aA2APX8 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Scn1aA2APX8 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn1aA2APX8 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn1aA2APX8 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn1aA2APX8 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn1aA2APX8 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn1aA2APX8 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn1aA2APX8 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Scn1aA2APX8 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn1aA2APX8 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Scn1aA2APX8 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.75□□□□□ -0.21
Scn1aA2APX8 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.75□□□□□ -0.21
Scn1aA2APX8 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms