Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Gm11736-201ENSMUST00000121468 505 ntBASIC6.76□□□□□ -1.33
Ubr4A2AN08 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ubr4A2AN08 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ubr4A2AN08 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Gm12196-201ENSMUST00000120954 262 ntBASIC6.76□□□□□ -1.33
Ubr4A2AN08 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ubr4A2AN08 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Lsm5-201ENSMUST00000170382 494 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ubr4A2AN08 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Map1b-203ENSMUST00000223725 2669 ntBASIC6.76□□□□□ -1.33
Ubr4A2AN08 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Gm3809-201ENSMUST00000180973 1006 ntBASIC6.76□□□□□ -1.33
Ubr4A2AN08 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Gm15645-202ENSMUST00000183393 1299 ntBASIC6.76□□□□□ -1.33
Ubr4A2AN08 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Gm26901-204ENSMUST00000193732 631 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC6.76□□□□□ -1.33
Ubr4A2AN08 CT009539.1-201ENSMUST00000226465 220 ntBASIC6.76□□□□□ -1.33
Ubr4A2AN08 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Gm17213-201ENSMUST00000165161 1360 ntBASIC6.76□□□□□ -1.33
Ubr4A2AN08 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Ubr4A2AN08 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Gm12811-201ENSMUST00000125237 667 ntTSL 3 BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Ubr4A2AN08 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Gm45094-201ENSMUST00000207013 617 ntBASIC6.75□□□□□ -1.33
Ubr4A2AN08 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Gm4157-201ENSMUST00000211647 679 ntBASIC6.75□□□□□ -1.33
Ubr4A2AN08 AC154669.1-201ENSMUST00000224405 482 ntBASIC6.75□□□□□ -1.33
Ubr4A2AN08 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 n-R5s64-201ENSMUST00000102019 119 ntBASIC6.75□□□□□ -1.33
Ubr4A2AN08 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC6.75□□□□□ -1.33
Ubr4A2AN08 AC134860.1-201ENSMUST00000224867 660 ntBASIC6.75□□□□□ -1.33
Ubr4A2AN08 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Gm42432-201ENSMUST00000197902 1617 ntBASIC6.75□□□□□ -1.33
Ubr4A2AN08 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC6.75□□□□□ -1.33
Ubr4A2AN08 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Ubr4A2AN08 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms