Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3854A0A1B0GSS6 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 Gm11964-201ENSMUST00000120982 444 ntBASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 Gm2383-201ENSMUST00000181461 807 ntBASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 Mettl6-204ENSMUST00000227595 1027 ntBASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3854A0A1B0GSS6 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3854A0A1B0GSS6 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3854A0A1B0GSS6 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3854A0A1B0GSS6 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3854A0A1B0GSS6 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.16□□□□□ -0.3
Gm3854A0A1B0GSS6 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3854A0A1B0GSS6 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3854A0A1B0GSS6 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3854A0A1B0GSS6 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.16□□□□□ -0.3
Gm3854A0A1B0GSS6 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3854A0A1B0GSS6 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3854A0A1B0GSS6 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3854A0A1B0GSS6 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3854A0A1B0GSS6 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Gm3854A0A1B0GSS6 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3854A0A1B0GSS6 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Gm3854A0A1B0GSS6 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3854A0A1B0GSS6 Gm11222-201ENSMUST00000119005 738 ntBASIC13.16□□□□□ -0.3
Gm3854A0A1B0GSS6 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.16□□□□□ -0.3
Gm3854A0A1B0GSS6 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.16□□□□□ -0.3
Gm3854A0A1B0GSS6 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3854A0A1B0GSS6 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3854A0A1B0GSS6 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3854A0A1B0GSS6 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.16□□□□□ -0.3
Gm3854A0A1B0GSS6 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.16□□□□□ -0.3
Gm3854A0A1B0GSS6 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.16□□□□□ -0.3
Gm3854A0A1B0GSS6 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.16□□□□□ -0.3
Gm3854A0A1B0GSS6 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.16□□□□□ -0.3
Gm3854A0A1B0GSS6 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3854A0A1B0GSS6 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3854A0A1B0GSS6 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.16□□□□□ -0.3
Gm3854A0A1B0GSS6 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3854A0A1B0GSS6 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms