Protein–RNA interactions for Protein: A0A0U1RNF2

Lcmt1, Leucine carboxyl methyltransferase 1, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcmt1A0A0U1RNF2 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Lcmt1A0A0U1RNF2 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Lcmt1A0A0U1RNF2 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Lcmt1A0A0U1RNF2 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC14.71□□□□□ -0.06
Lcmt1A0A0U1RNF2 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Lcmt1A0A0U1RNF2 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 Gm37917-201ENSMUST00000194711 392 ntBASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 Gm15823-201ENSMUST00000064305 670 ntBASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Lcmt1A0A0U1RNF2 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Lcmt1A0A0U1RNF2 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt1A0A0U1RNF2 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.69□□□□□ -0.06
Lcmt1A0A0U1RNF2 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt1A0A0U1RNF2 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt1A0A0U1RNF2 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt1A0A0U1RNF2 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt1A0A0U1RNF2 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt1A0A0U1RNF2 Gm12859-201ENSMUST00000117834 427 ntBASIC14.69□□□□□ -0.06
Lcmt1A0A0U1RNF2 Gm12341-201ENSMUST00000119724 503 ntBASIC14.69□□□□□ -0.06
Lcmt1A0A0U1RNF2 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Lcmt1A0A0U1RNF2 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.69□□□□□ -0.06
Lcmt1A0A0U1RNF2 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Lcmt1A0A0U1RNF2 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.69□□□□□ -0.06
Lcmt1A0A0U1RNF2 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt1A0A0U1RNF2 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt1A0A0U1RNF2 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.69□□□□□ -0.06
Lcmt1A0A0U1RNF2 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt1A0A0U1RNF2 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Lcmt1A0A0U1RNF2 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt1A0A0U1RNF2 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt1A0A0U1RNF2 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt1A0A0U1RNF2 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Lcmt1A0A0U1RNF2 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt1A0A0U1RNF2 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.69□□□□□ -0.06
Lcmt1A0A0U1RNF2 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt1A0A0U1RNF2 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt1A0A0U1RNF2 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt1A0A0U1RNF2 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Lcmt1A0A0U1RNF2 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt1A0A0U1RNF2 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt1A0A0U1RNF2 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.69□□□□□ -0.06
Lcmt1A0A0U1RNF2 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt1A0A0U1RNF2 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Lcmt1A0A0U1RNF2 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.69□□□□□ -0.06
Lcmt1A0A0U1RNF2 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Lcmt1A0A0U1RNF2 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Lcmt1A0A0U1RNF2 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lcmt1A0A0U1RNF2 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lcmt1A0A0U1RNF2 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Lcmt1A0A0U1RNF2 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lcmt1A0A0U1RNF2 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lcmt1A0A0U1RNF2 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lcmt1A0A0U1RNF2 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lcmt1A0A0U1RNF2 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lcmt1A0A0U1RNF2 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Lcmt1A0A0U1RNF2 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lcmt1A0A0U1RNF2 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lcmt1A0A0U1RNF2 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lcmt1A0A0U1RNF2 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Lcmt1A0A0U1RNF2 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lcmt1A0A0U1RNF2 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Lcmt1A0A0U1RNF2 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms