Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC9.11□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC9.11□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Gm15393-201ENSMUST00000120499 219 ntBASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Gm27525-201ENSMUST00000184465 107 ntBASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Gm46209-201ENSMUST00000217912 553 ntBASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Shd-206ENSMUST00000225145 998 ntBASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Gm5385-201ENSMUST00000118988 1559 ntBASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC9.09□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC9.09□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC9.09□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC9.09□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Gm27196-201ENSMUST00000184787 2582 ntBASIC9.09□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC9.09□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Gm6415-201ENSMUST00000118488 348 ntBASIC9.09□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC9.09□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Trav13-4-dv7A0A075B6C2 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC9.09□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms