Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb3S4R1G7 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11.93□□□□□ -0.5
H2afb3S4R1G7 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
H2afb3S4R1G7 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
H2afb3S4R1G7 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb3S4R1G7 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb3S4R1G7 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb3S4R1G7 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb3S4R1G7 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb3S4R1G7 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
H2afb3S4R1G7 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb3S4R1G7 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb3S4R1G7 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb3S4R1G7 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb3S4R1G7 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb3S4R1G7 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb3S4R1G7 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb3S4R1G7 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
H2afb3S4R1G7 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
H2afb3S4R1G7 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb3S4R1G7 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb3S4R1G7 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb3S4R1G7 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb3S4R1G7 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb3S4R1G7 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb3S4R1G7 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb3S4R1G7 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb3S4R1G7 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.92□□□□□ -0.5
H2afb3S4R1G7 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb3S4R1G7 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb3S4R1G7 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb3S4R1G7 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.92□□□□□ -0.5
H2afb3S4R1G7 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb3S4R1G7 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb3S4R1G7 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb3S4R1G7 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb3S4R1G7 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb3S4R1G7 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb3S4R1G7 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.92□□□□□ -0.5
H2afb3S4R1G7 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb3S4R1G7 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.92□□□□□ -0.5
H2afb3S4R1G7 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb3S4R1G7 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb3S4R1G7 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC11.92□□□□□ -0.5
H2afb3S4R1G7 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.92□□□□□ -0.5
H2afb3S4R1G7 AC126408.1-201ENSMUST00000225184 523 ntBASIC11.92□□□□□ -0.5
H2afb3S4R1G7 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
H2afb3S4R1G7 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb3S4R1G7 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb3S4R1G7 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
H2afb3S4R1G7 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb3S4R1G7 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb3S4R1G7 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb3S4R1G7 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb3S4R1G7 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb3S4R1G7 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
H2afb3S4R1G7 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.92□□□□□ -0.5
H2afb3S4R1G7 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
H2afb3S4R1G7 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms